RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
SOX4-201ENST00000244745 ATP8B2P98198 1209 aa22.96■■□□□ 1.27
SOX4-201ENST00000244745 MAP3K12Q12852 859 aa22.96■■□□□ 1.27
SOX4-201ENST00000244745 CEP85Q6P2H3 762 aa22.96■■□□□ 1.27
SOX4-201ENST00000244745 ORC3Q9UBD5 711 aaPredicted RBP22.96■■□□□ 1.27
SOX4-201ENST00000244745 COL17A1Q9UMD9 1497 aaPredicted RBP22.95■■□□□ 1.27
SOX4-201ENST00000244745 PPIP5K1Q6PFW1 1433 aa22.95■■□□□ 1.27
SOX4-201ENST00000244745 RANBP6O60518 1105 aaKnown RBP22.95■■□□□ 1.26
SOX4-201ENST00000244745 ZSCAN16Q9H4T2 348 aaPredicted RBP22.95■■□□□ 1.26
SOX4-201ENST00000244745 POGZQ7Z3K3 1410 aa22.95■■□□□ 1.26
SOX4-201ENST00000244745 ZFP91Q96JP5 570 aaPredicted RBP22.95■■□□□ 1.26
SOX4-201ENST00000244745 PHAXQ9H814 394 aaKnown RBP22.95■■□□□ 1.26
SOX4-201ENST00000244745 CCDC171Q6TFL3 1326 aa22.95■■□□□ 1.26
SOX4-201ENST00000244745 ENOX2Q16206 610 aaKnown RBP22.95■■□□□ 1.26
SOX4-201ENST00000244745 PLEKHM2Q8IWE5 1019 aa22.95■■□□□ 1.26
SOX4-201ENST00000244745 BRF1Q92994 677 aa22.95■■□□□ 1.26
SOX4-201ENST00000244745 ZBTB3Q9H5J0 574 aa22.95■■□□□ 1.26
SOX4-201ENST00000244745 FKBP15Q5T1M5 1219 aa22.94■■□□□ 1.26
SOX4-201ENST00000244745 WDR62O43379 1518 aa22.94■■□□□ 1.26
SOX4-201ENST00000244745 PER1O15534 1290 aaPredicted RBP22.94■■□□□ 1.26
SOX4-201ENST00000244745 CCDC150Q8NCX0 1101 aa22.94■■□□□ 1.26
SOX4-201ENST00000244745 VAMP4O75379 141 aa22.94■■□□□ 1.26
SOX4-201ENST00000244745 CCDC186Q7Z3E2 898 aa22.93■■□□□ 1.26
SOX4-201ENST00000244745 PZPP20742 1482 aa22.93■■□□□ 1.26
SOX4-201ENST00000244745 NEFHP12036 1026 aa22.93■■□□□ 1.26
SOX4-201ENST00000244745 UBE3BQ7Z3V4 1068 aa22.93■■□□□ 1.26
SOX4-201ENST00000244745 ZRANB1Q9UGI0 708 aa22.93■■□□□ 1.26
SOX4-201ENST00000244745 DCTPP1Q9H773 170 aa22.93■■□□□ 1.26
SOX4-201ENST00000244745 MCM3P25205 808 aa22.93■■□□□ 1.26
SOX4-201ENST00000244745 RBM5P52756 815 aaKnown RBP eCLIP22.93■■□□□ 1.26
SOX4-201ENST00000244745 DDX46Q7L014 1031 aaKnown RBP22.93■■□□□ 1.26
SOX4-201ENST00000244745 TTC12Q9H892 705 aaPredicted RBP22.93■■□□□ 1.26
SOX4-201ENST00000244745 SLC5A1P13866 664 aa22.93■■□□□ 1.26
SOX4-201ENST00000244745 ZRSR2Q15696 482 aaKnown RBP22.93■■□□□ 1.26
SOX4-201ENST00000244745 METAP2P50579 478 aaKnown RBP eCLIP22.92■■□□□ 1.26
SOX4-201ENST00000244745 TMEM67Q5HYA8 995 aa22.92■■□□□ 1.26
SOX4-201ENST00000244745 HS1BP3Q53T59 392 aa22.92■■□□□ 1.26
SOX4-201ENST00000244745 ANKRD18BA2A2Z9 1011 aa22.92■■□□□ 1.26
SOX4-201ENST00000244745 IARSP41252 1262 aaKnown RBP22.92■■□□□ 1.26
SOX4-201ENST00000244745 CTCFLQ8NI51 663 aaPredicted RBP22.92■■□□□ 1.26
SOX4-201ENST00000244745 FAM200AQ8TCP9 573 aa22.92■■□□□ 1.26
SOX4-201ENST00000244745 BBXQ8WY36 941 aaPredicted RBP22.92■■□□□ 1.26
SOX4-201ENST00000244745 DNAJC25Q9H1X3 360 aa22.92■■□□□ 1.26
SOX4-201ENST00000244745 SEC63Q9UGP8 760 aaKnown RBP22.92■■□□□ 1.26
SOX4-201ENST00000244745 NUTM2BA6NNL0 878 aaPredicted RBP22.91■■□□□ 1.26
SOX4-201ENST00000244745 NUTM2EB1AL46 878 aaPredicted RBP22.91■■□□□ 1.26
SOX4-201ENST00000244745 MICU3Q86XE3 530 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 NUTM2AQ8IVF1 878 aaPredicted RBP22.91■■□□□ 1.26
SOX4-201ENST00000244745 DACT1Q9NYF0 836 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 DNMT1P26358 1616 aaKnown RBP22.91■■□□□ 1.26
SOX4-201ENST00000244745 POTEB2H3BUK9 544 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 YEATS4O95619 227 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 CAVIN4Q5BKX8 364 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 USP26Q9BXU7 913 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 TRMT112Q9UI30 125 aaKnown RBP22.91■■□□□ 1.26
SOX4-201ENST00000244745 Q6ZUG5 572 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 POLKQ9UBT6 870 aa22.91■■□□□ 1.26
SOX4-201ENST00000244745 NLRP5P59047 1200 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 NCOA7Q8NI08 942 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 ZNF76P36508 570 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 KRT24Q2M2I5 525 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 AK2P54819 239 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
SOX4-201ENST00000244745 CAVIN2O95810 425 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 SEPT7Q16181 437 aaKnown RBP22.9■■□□□ 1.26
SOX4-201ENST00000244745 SLC26A6Q9BXS9 759 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 CWC25Q9NXE8 425 aaPredicted RBP22.9■■□□□ 1.26
SOX4-201ENST00000244745 DNA2P51530 1060 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 CACNA2D4Q7Z3S7 1137 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 MKNK2Q9HBH9 465 aa22.9■■□□□ 1.26
SOX4-201ENST00000244745 NMIQ13287 307 aaPredicted RBP22.89■■□□□ 1.26
SOX4-201ENST00000244745 KIAA0556O60303 1618 aa22.89■■□□□ 1.26
SOX4-201ENST00000244745 FAM107BQ9H098 131 aa22.89■■□□□ 1.26
SOX4-201ENST00000244745 PLCH2O75038 1416 aa22.89■■□□□ 1.25
SOX4-201ENST00000244745 FOXO3O43524 673 aa22.89■■□□□ 1.25
SOX4-201ENST00000244745 TSG101Q99816 390 aa22.89■■□□□ 1.25
SOX4-201ENST00000244745 DENND4BO75064 1496 aaPredicted RBP22.89■■□□□ 1.25
SOX4-201ENST00000244745 GPTP24298 496 aa22.89■■□□□ 1.25
SOX4-201ENST00000244745 SKILP12757 684 aa22.88■■□□□ 1.25
SOX4-201ENST00000244745 SMAP1Q8IYB5 467 aaPredicted RBP22.88■■□□□ 1.25
SOX4-201ENST00000244745 RNF187Q5TA31 235 aaPredicted RBP22.88■■□□□ 1.25
SOX4-201ENST00000244745 MSH6P52701 1360 aa22.88■■□□□ 1.25
SOX4-201ENST00000244745 MPHOSPH10O00566 681 aaKnown RBP22.88■■□□□ 1.25
SOX4-201ENST00000244745 IQCA1Q86XH1 822 aa22.88■■□□□ 1.25
SOX4-201ENST00000244745 RNF41Q9H4P4 317 aaPredicted RBP22.88■■□□□ 1.25
SOX4-201ENST00000244745 KLF18A0A0U1RQI7 1052 aa22.88■■□□□ 1.25
SOX4-201ENST00000244745 AOPEPQ8N6M6 819 aa22.88■■□□□ 1.25
SOX4-201ENST00000244745 ZSCAN29Q8IWY8 852 aaPredicted RBP22.87■■□□□ 1.25
SOX4-201ENST00000244745 ZSWIM4Q9H7M6 989 aa22.87■■□□□ 1.25
SOX4-201ENST00000244745 CCDC102BQ68D86 513 aa22.87■■□□□ 1.25
SOX4-201ENST00000244745 CATIPQ7Z7H3 387 aa22.87■■□□□ 1.25
SOX4-201ENST00000244745 SMARCC1Q92922 1105 aaPredicted RBP22.87■■□□□ 1.25
SOX4-201ENST00000244745 GNG11P61952 73 aa22.87■■□□□ 1.25
SOX4-201ENST00000244745 PA2G4Q9UQ80 394 aaKnown RBP22.87■■□□□ 1.25
SOX4-201ENST00000244745 PHACTR3Q96KR7 559 aa22.87■■□□□ 1.25
SOX4-201ENST00000244745 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.87■■□□□ 1.25
SOX4-201ENST00000244745 SYKP43405 635 aa22.87■■□□□ 1.25
SOX4-201ENST00000244745 CCDC12Q8WUD4 166 aaPredicted RBP22.87■■□□□ 1.25
SOX4-201ENST00000244745 UBASH3AP57075 661 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms