RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 MAP2P11137 1827 aaKnown RBP10.88□□□□□ -0.67
SRSF6-201ENST00000244020 ELF2Q15723 593 aa10.88□□□□□ -0.67
SRSF6-201ENST00000244020 AATKQ6ZMQ8 1374 aa10.87□□□□□ -0.67
SRSF6-201ENST00000244020 NEXMIFQ5QGS0 1516 aa10.87□□□□□ -0.67
SRSF6-201ENST00000244020 NR1I2O75469 434 aa10.87□□□□□ -0.67
SRSF6-201ENST00000244020 TERF2Q15554 542 aa10.87□□□□□ -0.67
SRSF6-201ENST00000244020 NEMFO60524 1076 aa10.87□□□□□ -0.67
SRSF6-201ENST00000244020 ANKRD1Q15327 319 aa10.87□□□□□ -0.67
SRSF6-201ENST00000244020 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
SRSF6-201ENST00000244020 TOMM22Q9NS69 142 aa10.87□□□□□ -0.67
SRSF6-201ENST00000244020 CCDC73Q6ZRK6 1079 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 CLSTN2Q9H4D0 955 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 TPCN1Q9ULQ1 816 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
SRSF6-201ENST00000244020 MORC2Q9Y6X9 1032 aaPredicted RBP10.86□□□□□ -0.67
SRSF6-201ENST00000244020 LARP1Q6PKG0 1096 aaKnown RBP10.86□□□□□ -0.67
SRSF6-201ENST00000244020 LRRC8AQ8IWT6 810 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 PI4K2BQ8TCG2 481 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 SSH3Q8TE77 659 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 LEO1Q8WVC0 666 aaPredicted RBP10.86□□□□□ -0.67
SRSF6-201ENST00000244020 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 LTV1Q96GA3 475 aaPredicted RBP10.86□□□□□ -0.67
SRSF6-201ENST00000244020 CALCOCO1Q9P1Z2 691 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 USP16Q9Y5T5 823 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 CDC42BPGQ6DT37 1551 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 CCDC69A6NI79 296 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 SLU7O95391 586 aaKnown RBP10.86□□□□□ -0.67
SRSF6-201ENST00000244020 NOL10Q9BSC4 688 aaKnown RBP10.86□□□□□ -0.67
SRSF6-201ENST00000244020 ZSWIM6Q9HCJ5 1215 aa10.86□□□□□ -0.67
SRSF6-201ENST00000244020 C9orf78Q9NZ63 289 aaPredicted RBP10.86□□□□□ -0.67
SRSF6-201ENST00000244020 SLFN14P0C7P3 912 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 CCDC144BQ3MJ40 725 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 CCDC144CPQ8IYA2 1237 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 ATP7BP35670 1465 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 PES1O00541 588 aaKnown RBP10.85□□□□□ -0.67
SRSF6-201ENST00000244020 KINO60870 393 aaKnown RBP10.85□□□□□ -0.67
SRSF6-201ENST00000244020 ARID5BQ14865 1188 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 KMT5BQ4FZB7 885 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 PLA2G4DQ86XP0 818 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 ERO1AQ96HE7 468 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 PHAXQ9H814 394 aaKnown RBP10.85□□□□□ -0.67
SRSF6-201ENST00000244020 ECHDC1Q9NTX5 307 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 CFAP45Q9UL16 551 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 CAVIN2O95810 425 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 TAF7Q15545 349 aaPredicted RBP10.85□□□□□ -0.67
SRSF6-201ENST00000244020 CREB3L3Q68CJ9 461 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 TDRD7Q8NHU6 1098 aaKnown RBP10.85□□□□□ -0.67
SRSF6-201ENST00000244020 FSD1Q9BTV5 496 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 AACSQ86V21 672 aa10.85□□□□□ -0.67
SRSF6-201ENST00000244020 BMS1Q14692 1282 aaKnown RBP10.84□□□□□ -0.67
SRSF6-201ENST00000244020 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 SDF4Q9BRK5 362 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 ELP1O95163 1332 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 ANKRD26Q9UPS8 1709 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 USP27XA6NNY8 438 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 SMC2O95347 1197 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 PLPPR3Q6T4P5 718 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 GNAT3A8MTJ3 354 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 NBPF7P0C2Y1 421 aaPredicted RBP10.84□□□□□ -0.67
SRSF6-201ENST00000244020 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
SRSF6-201ENST00000244020 SNW1Q13573 536 aaKnown RBP10.84□□□□□ -0.67
SRSF6-201ENST00000244020 MLECQ14165 292 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 SF3A1Q15459 793 aaKnown RBP10.84□□□□□ -0.67
SRSF6-201ENST00000244020 FBXO38Q6PIJ6 1188 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 GTF3C6Q969F1 213 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 TM6SF1Q9BZW5 370 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 NAT10Q9H0A0 1025 aaKnown RBP10.84□□□□□ -0.67
SRSF6-201ENST00000244020 CENPHQ9H3R5 247 aa10.84□□□□□ -0.67
SRSF6-201ENST00000244020 ABCA9Q8IUA7 1624 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 STX1AQ16623 288 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 SYTL4Q96C24 671 aaPredicted RBP10.83□□□□□ -0.68
SRSF6-201ENST00000244020 EVI5LQ96CN4 794 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 KIF2AO00139 706 aaPredicted RBP10.83□□□□□ -0.68
SRSF6-201ENST00000244020 POLR3GO15318 223 aaPredicted RBP10.83□□□□□ -0.68
SRSF6-201ENST00000244020 TTLL5Q6EMB2 1281 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 IL17RAQ96F46 866 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 MAP3K19Q56UN5 1328 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 KIF20BQ96Q89 1820 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 CEP57L1Q8IYX8 460 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 HIP1O00291 1037 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 TTC41PQ6P2S7 1318 aa10.83□□□□□ -0.68
SRSF6-201ENST00000244020 CCAR1Q8IX12 1150 aaKnown RBP10.83□□□□□ -0.68
SRSF6-201ENST00000244020 ME1P48163 572 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 FAM227BQ96M60 508 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 TTC21BQ7Z4L5 1316 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 PI4KAP2A4QPH2 592 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 G3BP1Q13283 466 aaKnown RBP eCLIP10.82□□□□□ -0.68
SRSF6-201ENST00000244020 PI4KAP1Q8N8J0 262 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 ANO10Q9NW15 660 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 TMEM51Q9NW97 253 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 ERCC6LQ2NKX8 1250 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 UBXN4Q92575 508 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 BRF1Q92994 677 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 ST7Q9NRC1 585 aa10.82□□□□□ -0.68
SRSF6-201ENST00000244020 GTF2A1P52655 376 aaPredicted RBP10.81□□□□□ -0.68
SRSF6-201ENST00000244020 NMIQ13287 307 aaPredicted RBP10.81□□□□□ -0.68
SRSF6-201ENST00000244020 AXDND1Q5T1B0 1012 aaPredicted RBP10.81□□□□□ -0.68
SRSF6-201ENST00000244020 SYT10Q6XYQ8 523 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms