RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 BBOX1O75936 387 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 LBX1P52954 281 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 ZNF790Q6PG37 636 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 KIF6Q6ZMV9 814 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 AMIGO3Q86WK7 504 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 EYA3Q99504 573 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 EP400Q96L91 3159 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 SCN11AQ9UI33 1791 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 CAMTA2O94983 1202 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 CANXP27824 592 aaKnown RBP3.05□□□□□ -1.92
PRKD3-201ENST00000234179 C7orf43Q8WVR3 580 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 BCL2L12Q9HB09 334 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 PGAP2Q9UHJ9 254 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 EAPPQ56P03 285 aaPredicted RBP3.05□□□□□ -1.92
PRKD3-201ENST00000234179 BICDL1Q6ZP65 573 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 SYNE4Q8N205 404 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 LARGE2Q8N3Y3 721 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 DPF2Q92785 391 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 ZNF496Q96IT1 587 aaPredicted RBP3.05□□□□□ -1.92
PRKD3-201ENST00000234179 GPR101Q96P66 508 aaPredicted RBP3.05□□□□□ -1.92
PRKD3-201ENST00000234179 H7C1D1 291 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 CTU1Q7Z7A3 348 aaKnown RBP3.04□□□□□ -1.92
PRKD3-201ENST00000234179 CEMIPQ8WUJ3 1361 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 HAX1O00165 279 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 DDNO94850 711 aaPredicted RBP3.04□□□□□ -1.92
PRKD3-201ENST00000234179 ALDH1A1P00352 501 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 CRY2Q49AN0 593 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 INTS3Q68E01 1043 aaKnown RBP3.04□□□□□ -1.92
PRKD3-201ENST00000234179 MAMSTRQ6ZN01 415 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 PAXIP1Q6ZW49 1069 aaPredicted RBP3.04□□□□□ -1.92
PRKD3-201ENST00000234179 C2orf69Q8N8R5 385 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 ZNRF3Q9ULT6 936 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 ZNF609O15014 1411 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 FER1L6Q2WGJ9 1857 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 LMOD3Q0VAK6 560 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 CCDC85CA6NKD9 419 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 CIAPIN1Q6FI81 312 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 WDHD1O75717 1129 aaPredicted RBP3.04□□□□□ -1.92
PRKD3-201ENST00000234179 NLRP3Q96P20 1036 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 RTFDC1Q9BY42 306 aaPredicted RBP3.04□□□□□ -1.92
PRKD3-201ENST00000234179 PANK3Q9H999 370 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 ADAMTSL1Q8N6G6 1762 aa3.04□□□□□ -1.92
PRKD3-201ENST00000234179 NF2P35240 595 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 SLC10A5Q5PT55 438 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 TBC1D9BQ66K14 1250 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 NIP7Q9Y221 180 aaKnown RBP eCLIP3.03□□□□□ -1.92
PRKD3-201ENST00000234179 SSUH2Q9Y2M2 353 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 DGKZQ13574 1117 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 FAM161AQ3B820 660 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 SP8Q8IXZ3 490 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 BTBD11A6QL63 1104 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 RGMBQ6NW40 437 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 BCL2L13Q9BXK5 485 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 CFHR5Q9BXR6 569 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 MCOLN1Q9GZU1 580 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 GPRC5DQ9NZD1 345 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 UBR2Q8IWV8 1755 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 PITPNM2Q9BZ72 1349 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 MYH14Q7Z406 1995 aaKnown RBP3.03□□□□□ -1.92
PRKD3-201ENST00000234179 VIRMAQ69YN4 1812 aaKnown RBP3.03□□□□□ -1.92
PRKD3-201ENST00000234179 FBLN1P23142 703 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 INHBEP58166 350 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 CHRDL2Q6WN34 429 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 ATP6V0A2Q9Y487 856 aa3.03□□□□□ -1.92
PRKD3-201ENST00000234179 PPEF1O14829 653 aaPredicted RBP3.03□□□□□ -1.93
PRKD3-201ENST00000234179 PPIP5K2O43314 1243 aa3.03□□□□□ -1.93
PRKD3-201ENST00000234179 HTRA3P83110 453 aa3.03□□□□□ -1.93
PRKD3-201ENST00000234179 KIAA2012Q0VF49 1180 aa3.03□□□□□ -1.93
PRKD3-201ENST00000234179 SREBF2Q12772 1141 aa3.03□□□□□ -1.93
PRKD3-201ENST00000234179 MTHFSDQ2M296 383 aaKnown RBP3.03□□□□□ -1.93
PRKD3-201ENST00000234179 MAP3K15Q6ZN16 1313 aa3.03□□□□□ -1.93
PRKD3-201ENST00000234179 TAF7Q15545 349 aaPredicted RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 DCPSQ96C86 337 aaKnown RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 AFDNP55196 1824 aaKnown RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 MYO3BQ8WXR4 1341 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 BCORQ6W2J9 1755 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 HOXB7P09629 217 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 OTUD7BQ6GQQ9 843 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 DDX46Q7L014 1031 aaKnown RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 AEBP1Q8IUX7 1158 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 GBA2Q9HCG7 927 aaPredicted RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 TBC1D2BQ9UPU7 963 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 ZNF541Q9H0D2 1346 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 CELF2O95319 508 aaKnown RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 MAP1SQ66K74 1059 aaPredicted RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 DPP8Q6V1X1 898 aaPredicted RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 SAPCD2Q86UD0 394 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 MPNDQ8N594 471 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 ZNF277Q9NRM2 450 aaPredicted RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 GJA3Q9Y6H8 435 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 COL1A1P02452 1464 aaPredicted RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 AMER1Q5JTC6 1135 aaPredicted RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 GIGYF2Q6Y7W6 1299 aaKnown RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 SULF1Q8IWU6 871 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 UTP14AQ9BVJ6 771 aaKnown RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 FOXD4L1Q9NU39 408 aa3.02□□□□□ -1.93
PRKD3-201ENST00000234179 ZNF330Q9Y3S2 320 aaPredicted RBP3.02□□□□□ -1.93
PRKD3-201ENST00000234179 PRMT2P55345 433 aa3.01□□□□□ -1.93
PRKD3-201ENST00000234179 HUNKP57058 714 aa3.01□□□□□ -1.93
PRKD3-201ENST00000234179 SLC39A6Q13433 755 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms