RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 FUCA2Q9BTY2 467 aa20.92■□□□□ 0.94
PRPF19-201ENST00000227524 GJB2P29033 226 aa20.92■□□□□ 0.94
PRPF19-201ENST00000227524 PTH1RQ03431 593 aa20.92■□□□□ 0.94
PRPF19-201ENST00000227524 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
PRPF19-201ENST00000227524 OVOS2A0A0G2JMS6 1433 aa20.91■□□□□ 0.94
PRPF19-201ENST00000227524 RNMTO43148 476 aaKnown RBP20.91■□□□□ 0.94
PRPF19-201ENST00000227524 OS9Q13438 667 aaPredicted RBP20.91■□□□□ 0.94
PRPF19-201ENST00000227524 VPS53Q5VIR6 699 aa20.91■□□□□ 0.94
PRPF19-201ENST00000227524 KLHL34Q8N239 644 aa20.91■□□□□ 0.94
PRPF19-201ENST00000227524 PDRG1Q9NUG6 133 aa20.91■□□□□ 0.94
PRPF19-201ENST00000227524 MTMR6Q9Y217 621 aa20.91■□□□□ 0.94
PRPF19-201ENST00000227524 LTBP4Q8N2S1 1624 aa20.91■□□□□ 0.94
PRPF19-201ENST00000227524 ADCY9O60503 1353 aa20.91■□□□□ 0.94
PRPF19-201ENST00000227524 KDM4AO75164 1064 aa20.9■□□□□ 0.94
PRPF19-201ENST00000227524 MYRIPQ8NFW9 859 aa20.9■□□□□ 0.94
PRPF19-201ENST00000227524 JAKMIP1Q96N16 626 aaKnown RBP20.9■□□□□ 0.94
PRPF19-201ENST00000227524 ADCK5Q3MIX3 580 aa20.9■□□□□ 0.94
PRPF19-201ENST00000227524 DNTTIP2Q5QJE6 756 aaKnown RBP20.9■□□□□ 0.94
PRPF19-201ENST00000227524 CERKQ8TCT0 537 aa20.9■□□□□ 0.94
PRPF19-201ENST00000227524 KCNB2Q92953 911 aa20.9■□□□□ 0.94
PRPF19-201ENST00000227524 ZSCAN31Q96LW9 406 aaPredicted RBP20.9■□□□□ 0.94
PRPF19-201ENST00000227524 TM6SF1Q9BZW5 370 aa20.9■□□□□ 0.94
PRPF19-201ENST00000227524 TTC12Q9H892 705 aaPredicted RBP20.9■□□□□ 0.94
PRPF19-201ENST00000227524 KCNQ3O43525 872 aa20.89■□□□□ 0.94
PRPF19-201ENST00000227524 DNM1Q05193 864 aaKnown RBP20.89■□□□□ 0.94
PRPF19-201ENST00000227524 MTX1Q13505 466 aa20.89■□□□□ 0.94
PRPF19-201ENST00000227524 NOLC1Q14978 699 aaKnown RBP eCLIP20.89■□□□□ 0.94
PRPF19-201ENST00000227524 C1orf141Q5JVX7 400 aa20.89■□□□□ 0.94
PRPF19-201ENST00000227524 PRPF40BQ6NWY9 871 aaKnown RBP20.89■□□□□ 0.94
PRPF19-201ENST00000227524 ZSWIM6Q9HCJ5 1215 aa20.89■□□□□ 0.94
PRPF19-201ENST00000227524 SH2B1Q9NRF2 756 aaPredicted RBP20.89■□□□□ 0.94
PRPF19-201ENST00000227524 GIMAP6Q6P9H5 292 aa20.89■□□□□ 0.93
PRPF19-201ENST00000227524 CLASRPQ8N2M8 674 aaKnown RBP20.89■□□□□ 0.93
PRPF19-201ENST00000227524 CYP46A1Q9Y6A2 500 aa20.88■□□□□ 0.93
PRPF19-201ENST00000227524 ST3GAL1Q11201 340 aa20.87■□□□□ 0.93
PRPF19-201ENST00000227524 CHMP4AQ9BY43 222 aa20.87■□□□□ 0.93
PRPF19-201ENST00000227524 ECHDC1Q9NTX5 307 aa20.87■□□□□ 0.93
PRPF19-201ENST00000227524 ANXA1P04083 346 aa20.87■□□□□ 0.93
PRPF19-201ENST00000227524 CSB-PGBD3P0DP91 1061 aa20.87■□□□□ 0.93
PRPF19-201ENST00000227524 TEFQ10587 303 aa20.87■□□□□ 0.93
PRPF19-201ENST00000227524 RAPGEF4Q8WZA2 1011 aa20.87■□□□□ 0.93
PRPF19-201ENST00000227524 PRIMPOLQ96LW4 560 aa20.87■□□□□ 0.93
PRPF19-201ENST00000227524 GPATCH3Q96I76 525 aa20.86■□□□□ 0.93
PRPF19-201ENST00000227524 SPTLC3Q9NUV7 552 aa20.86■□□□□ 0.93
PRPF19-201ENST00000227524 PKD1L3Q7Z443 1732 aa20.86■□□□□ 0.93
PRPF19-201ENST00000227524 SCN11AQ9UI33 1791 aa20.86■□□□□ 0.93
PRPF19-201ENST00000227524 DTNBO60941 627 aa20.86■□□□□ 0.93
PRPF19-201ENST00000227524 CCDC171Q6TFL3 1326 aa20.85■□□□□ 0.93
PRPF19-201ENST00000227524 KDM6AO15550 1401 aaPredicted RBP20.85■□□□□ 0.93
PRPF19-201ENST00000227524 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
PRPF19-201ENST00000227524 NECTIN1Q15223 517 aa20.85■□□□□ 0.93
PRPF19-201ENST00000227524 C17orf53Q8N3J3 647 aaPredicted RBP20.85■□□□□ 0.93
PRPF19-201ENST00000227524 PRDM11Q9NQV5 511 aa20.85■□□□□ 0.93
PRPF19-201ENST00000227524 VPS37CA5D8V6 355 aaPredicted RBP20.85■□□□□ 0.93
PRPF19-201ENST00000227524 ME3Q16798 604 aa20.85■□□□□ 0.93
PRPF19-201ENST00000227524 COL5A2P05997 1499 aaPredicted RBP20.84■□□□□ 0.93
PRPF19-201ENST00000227524 AP5Z1O43299 807 aa20.84■□□□□ 0.93
PRPF19-201ENST00000227524 IFIT2P09913 472 aaKnown RBP20.84■□□□□ 0.93
PRPF19-201ENST00000227524 TATP17735 454 aaPredicted RBP20.84■□□□□ 0.93
PRPF19-201ENST00000227524 EVI5LQ96CN4 794 aa20.84■□□□□ 0.93
PRPF19-201ENST00000227524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.84■□□□□ 0.93
PRPF19-201ENST00000227524 PLEKHG2Q9H7P9 1386 aa20.84■□□□□ 0.93
PRPF19-201ENST00000227524 HMGN5P82970 282 aaKnown RBP20.83■□□□□ 0.93
PRPF19-201ENST00000227524 ERC1Q8IUD2 1116 aa20.83■□□□□ 0.93
PRPF19-201ENST00000227524 PA2G4Q9UQ80 394 aaKnown RBP20.83■□□□□ 0.92
PRPF19-201ENST00000227524 RBM8AQ9Y5S9 174 aaKnown RBP20.83■□□□□ 0.92
PRPF19-201ENST00000227524 ALDH1L1O75891 902 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 PHKG2P15735 406 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 ZKSCAN1P17029 563 aaPredicted RBP20.82■□□□□ 0.92
PRPF19-201ENST00000227524 NECAB1Q8N987 351 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 FBXO41Q8TF61 875 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 WDR17Q8IZU2 1322 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 HEG1Q9ULI3 1381 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 GTF2F1P35269 517 aaKnown RBP eCLIP20.82■□□□□ 0.929e-10■■■■■ 35.5
PRPF19-201ENST00000227524 PLCB2Q00722 1185 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 CREB3L3Q68CJ9 461 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 DDX54Q8TDD1 881 aaKnown RBP20.82■□□□□ 0.92
PRPF19-201ENST00000227524 C9orf78Q9NZ63 289 aaPredicted RBP20.82■□□□□ 0.92
PRPF19-201ENST00000227524 ROBO1Q9Y6N7 1651 aa20.82■□□□□ 0.92
PRPF19-201ENST00000227524 DBF4Q9UBU7 674 aaPredicted RBP20.81■□□□□ 0.92
PRPF19-201ENST00000227524 TPCN1Q9ULQ1 816 aa20.81■□□□□ 0.92
PRPF19-201ENST00000227524 MAP3K2Q9Y2U5 619 aa20.81■□□□□ 0.92
PRPF19-201ENST00000227524 CYP27B1O15528 508 aa20.8■□□□□ 0.92
PRPF19-201ENST00000227524 CCDC192P0DO97 292 aa20.8■□□□□ 0.92
PRPF19-201ENST00000227524 ILDR1Q86SU0 546 aaPredicted RBP20.8■□□□□ 0.92
PRPF19-201ENST00000227524 AACSQ86V21 672 aa20.8■□□□□ 0.92
PRPF19-201ENST00000227524 NMIQ13287 307 aaPredicted RBP20.79■□□□□ 0.92
PRPF19-201ENST00000227524 TTC6Q86TZ1 520 aa20.79■□□□□ 0.92
PRPF19-201ENST00000227524 JARID2Q92833 1246 aaPredicted RBP20.79■□□□□ 0.92
PRPF19-201ENST00000227524 MAP4K1Q92918 833 aa20.79■□□□□ 0.92
PRPF19-201ENST00000227524 FAM227BQ96M60 508 aa20.79■□□□□ 0.92
PRPF19-201ENST00000227524 KCNF1Q9H3M0 494 aa20.79■□□□□ 0.92
PRPF19-201ENST00000227524 HIP1O00291 1037 aa20.79■□□□□ 0.92
PRPF19-201ENST00000227524 TPM3P06753 285 aa20.79■□□□□ 0.92
PRPF19-201ENST00000227524 KCNJ4P48050 445 aa20.79■□□□□ 0.92
PRPF19-201ENST00000227524 KRT85P78386 507 aa20.79■□□□□ 0.92
PRPF19-201ENST00000227524 LARP1BQ659C4 914 aaKnown RBP20.79■□□□□ 0.92
PRPF19-201ENST00000227524 SLC27A2O14975 620 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 CDC37L1Q7L3B6 337 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 KIAA1524Q8TCG1 905 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms