RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 BCL11AQ9H165 835 aa20.7■□□□□ 0.9
TVP23C-201ENST00000225576 COPRSQ9NQ92 184 aa20.7■□□□□ 0.9
TVP23C-201ENST00000225576 TBC1D2BQ9UPU7 963 aa20.7■□□□□ 0.9
TVP23C-201ENST00000225576 PA2G4Q9UQ80 394 aaKnown RBP20.7■□□□□ 0.9
TVP23C-201ENST00000225576 SEC24BO95487 1268 aa20.69■□□□□ 0.9
TVP23C-201ENST00000225576 MX1P20591 662 aa20.69■□□□□ 0.9
TVP23C-201ENST00000225576 RFX5P48382 616 aaPredicted RBP20.69■□□□□ 0.9
TVP23C-201ENST00000225576 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
TVP23C-201ENST00000225576 RC3H1Q5TC82 1133 aaKnown RBP20.69■□□□□ 0.9
TVP23C-201ENST00000225576 NLRP10Q86W26 655 aa20.69■□□□□ 0.9
TVP23C-201ENST00000225576 LINC00116Q8NCU8 138 aa20.69■□□□□ 0.9
TVP23C-201ENST00000225576 IL1RAPL2Q9NP60 686 aa20.69■□□□□ 0.9
TVP23C-201ENST00000225576 CNTNAP4Q9C0A0 1308 aa20.69■□□□□ 0.9
TVP23C-201ENST00000225576 PLA2G12BQ9BX93 195 aa20.68■□□□□ 0.9
TVP23C-201ENST00000225576 BCL11BQ9C0K0 894 aaPredicted RBP20.68■□□□□ 0.9
TVP23C-201ENST00000225576 AOX1Q06278 1338 aa20.68■□□□□ 0.9
TVP23C-201ENST00000225576 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
TVP23C-201ENST00000225576 FAM196AQ6ZSG2 479 aa20.68■□□□□ 0.9
TVP23C-201ENST00000225576 ZNF34Q8IZ26 560 aa20.68■□□□□ 0.9
TVP23C-201ENST00000225576 BTAF1O14981 1849 aa20.67■□□□□ 0.9
TVP23C-201ENST00000225576 CDHR2Q9BYE9 1310 aa20.67■□□□□ 0.9
TVP23C-201ENST00000225576 CAMTA2O94983 1202 aa20.67■□□□□ 0.9
TVP23C-201ENST00000225576 RBM6P78332 1123 aaKnown RBP20.67■□□□□ 0.9
TVP23C-201ENST00000225576 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
TVP23C-201ENST00000225576 CLASRPQ8N2M8 674 aaKnown RBP20.67■□□□□ 0.9
TVP23C-201ENST00000225576 UPF2Q9HAU5 1272 aaKnown RBP20.67■□□□□ 0.9
TVP23C-201ENST00000225576 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
TVP23C-201ENST00000225576 PTPN12Q05209 780 aaKnown RBP20.66■□□□□ 0.9
TVP23C-201ENST00000225576 RTL5Q5HYW3 569 aaPredicted RBP20.66■□□□□ 0.9
TVP23C-201ENST00000225576 RGL2O15211 777 aa20.65■□□□□ 0.9
TVP23C-201ENST00000225576 CDC45O75419 566 aa20.65■□□□□ 0.9
TVP23C-201ENST00000225576 SASH1O94885 1247 aa20.65■□□□□ 0.9
TVP23C-201ENST00000225576 GPTP24298 496 aa20.65■□□□□ 0.9
TVP23C-201ENST00000225576 CCNL1Q9UK58 526 aaPredicted RBP20.64■□□□□ 0.9
TVP23C-201ENST00000225576 MYH14Q7Z406 1995 aaKnown RBP20.64■□□□□ 0.89
TVP23C-201ENST00000225576 USP42Q9H9J4 1324 aaKnown RBP20.64■□□□□ 0.89
TVP23C-201ENST00000225576 EIF5BO60841 1220 aaKnown RBP20.63■□□□□ 0.89
TVP23C-201ENST00000225576 SDSP20132 328 aa20.63■□□□□ 0.89
TVP23C-201ENST00000225576 FAM89AQ96GI7 184 aa20.63■□□□□ 0.89
TVP23C-201ENST00000225576 CLEC4GQ6UXB4 293 aa20.63■□□□□ 0.89
TVP23C-201ENST00000225576 TBC1D9Q6ZT07 1266 aa20.63■□□□□ 0.89
TVP23C-201ENST00000225576 NUTM1Q86Y26 1132 aa20.63■□□□□ 0.89
TVP23C-201ENST00000225576 KLHDC4Q8TBB5 520 aa20.63■□□□□ 0.89
TVP23C-201ENST00000225576 SBF2Q86WG5 1849 aa20.62■□□□□ 0.89
TVP23C-201ENST00000225576 RPS6KA4O75676 772 aa20.62■□□□□ 0.89
TVP23C-201ENST00000225576 CSF1RP07333 972 aa20.62■□□□□ 0.89
TVP23C-201ENST00000225576 RXRBP28702 533 aa20.62■□□□□ 0.89
TVP23C-201ENST00000225576 KCNQ4P56696 695 aa20.62■□□□□ 0.89
TVP23C-201ENST00000225576 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
TVP23C-201ENST00000225576 SIL1Q9H173 461 aa20.62■□□□□ 0.89
TVP23C-201ENST00000225576 TRMT112Q9UI30 125 aaKnown RBP20.62■□□□□ 0.89
TVP23C-201ENST00000225576 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
TVP23C-201ENST00000225576 TTC41PQ6P2S7 1318 aa20.61■□□□□ 0.89
TVP23C-201ENST00000225576 UBN2Q6ZU65 1347 aa20.61■□□□□ 0.89
TVP23C-201ENST00000225576 ANKRD36CQ5JPF3 1778 aa20.61■□□□□ 0.89
TVP23C-201ENST00000225576 CHMP3Q9Y3E7 222 aa20.61■□□□□ 0.89
TVP23C-201ENST00000225576 NUP98P52948 1817 aa20.6■□□□□ 0.89
TVP23C-201ENST00000225576 IFIT2P09913 472 aaKnown RBP20.6■□□□□ 0.89
TVP23C-201ENST00000225576 AK7Q96M32 723 aa20.6■□□□□ 0.89
TVP23C-201ENST00000225576 IPO9Q96P70 1041 aaKnown RBP20.6■□□□□ 0.89
TVP23C-201ENST00000225576 TSHZ3Q63HK5 1081 aa20.59■□□□□ 0.89
TVP23C-201ENST00000225576 PI4K2BQ8TCG2 481 aa20.59■□□□□ 0.89
TVP23C-201ENST00000225576 TBC1D32Q96NH3 1257 aa20.59■□□□□ 0.89
TVP23C-201ENST00000225576 LY75O60449 1722 aa20.58■□□□□ 0.89
TVP23C-201ENST00000225576 IRS4O14654 1257 aaPredicted RBP20.58■□□□□ 0.89
TVP23C-201ENST00000225576 MFAP1P55081 439 aaKnown RBP20.58■□□□□ 0.89
TVP23C-201ENST00000225576 AACSQ86V21 672 aa20.58■□□□□ 0.89
TVP23C-201ENST00000225576 EAF2Q96CJ1 260 aaPredicted RBP20.58■□□□□ 0.89
TVP23C-201ENST00000225576 GPATCH3Q96I76 525 aa20.58■□□□□ 0.89
TVP23C-201ENST00000225576 FBXO3Q9UK99 471 aa20.58■□□□□ 0.89
TVP23C-201ENST00000225576 CIAO1O76071 339 aa20.58■□□□□ 0.88
TVP23C-201ENST00000225576 CCDC57Q2TAC2 916 aa20.58■□□□□ 0.88
TVP23C-201ENST00000225576 SUSD4Q5VX71 490 aa20.58■□□□□ 0.88
TVP23C-201ENST00000225576 CASC1Q6TDU7 716 aa20.58■□□□□ 0.88
TVP23C-201ENST00000225576 UTP14AQ9BVJ6 771 aaKnown RBP20.58■□□□□ 0.88
TVP23C-201ENST00000225576 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.88
TVP23C-201ENST00000225576 ERC2O15083 957 aa20.57■□□□□ 0.88
TVP23C-201ENST00000225576 PDE8AO60658 829 aa20.57■□□□□ 0.88
TVP23C-201ENST00000225576 GLRX3O76003 335 aaKnown RBP20.57■□□□□ 0.88
TVP23C-201ENST00000225576 IL15P40933 162 aaPredicted RBP20.57■□□□□ 0.88
TVP23C-201ENST00000225576 SYNE4Q8N205 404 aa20.57■□□□□ 0.88
TVP23C-201ENST00000225576 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
TVP23C-201ENST00000225576 DDRGK1Q96HY6 314 aa20.57■□□□□ 0.88
TVP23C-201ENST00000225576 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.57■□□□□ 0.88
TVP23C-201ENST00000225576 SH3TC1Q8TE82 1336 aa20.56■□□□□ 0.88
TVP23C-201ENST00000225576 EYA2O00167 538 aa20.56■□□□□ 0.88
TVP23C-201ENST00000225576 GNPATO15228 680 aa20.56■□□□□ 0.88
TVP23C-201ENST00000225576 CTSWP56202 376 aa20.56■□□□□ 0.88
TVP23C-201ENST00000225576 ATG9AQ7Z3C6 839 aa20.56■□□□□ 0.88
TVP23C-201ENST00000225576 NARFQ9UHQ1 456 aa20.56■□□□□ 0.88
TVP23C-201ENST00000225576 NIP7Q9Y221 180 aaKnown RBP eCLIP20.56■□□□□ 0.88
TVP23C-201ENST00000225576 RTCBQ9Y3I0 505 aaKnown RBP20.56■□□□□ 0.88
TVP23C-201ENST00000225576 HSP90B1P14625 803 aaKnown RBP20.55■□□□□ 0.88
TVP23C-201ENST00000225576 TFCP2Q12800 502 aa20.55■□□□□ 0.88
TVP23C-201ENST00000225576 IFIT5Q13325 482 aaKnown RBP20.55■□□□□ 0.88
TVP23C-201ENST00000225576 SLC27A3Q5K4L6 730 aa20.55■□□□□ 0.88
TVP23C-201ENST00000225576 C22orf23Q9BZE7 217 aa20.55■□□□□ 0.88
TVP23C-201ENST00000225576 BRWD3Q6RI45 1802 aa20.54■□□□□ 0.88
TVP23C-201ENST00000225576 HMGB2P26583 209 aaKnown RBP20.54■□□□□ 0.88
TVP23C-201ENST00000225576 TNNI3KQ59H18 835 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms