RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 ZSWIM6Q9HCJ5 1215 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 TAOK2Q9UL54 1235 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 TYRO3Q06418 890 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 ANO6Q4KMQ2 910 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 ZNF592Q92610 1267 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 NRKQ7Z2Y5 1582 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 C1orf141Q5JVX7 400 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 CCDC186Q7Z3E2 898 aa20.43■□□□□ 0.86
H2AFV-201ENST00000222690 TLR7Q9NYK1 1049 aaKnown RBP20.43■□□□□ 0.86
H2AFV-201ENST00000222690 EPB41L2O43491 1005 aaKnown RBP20.42■□□□□ 0.86
H2AFV-201ENST00000222690 PSMA5P28066 241 aa20.42■□□□□ 0.86
H2AFV-201ENST00000222690 RNF20Q5VTR2 975 aa20.42■□□□□ 0.86
H2AFV-201ENST00000222690 CCDC94Q9BW85 323 aaPredicted RBP20.42■□□□□ 0.86
H2AFV-201ENST00000222690 DBF4Q9UBU7 674 aaPredicted RBP20.42■□□□□ 0.86
H2AFV-201ENST00000222690 H3BQV1 296 aa20.42■□□□□ 0.86
H2AFV-201ENST00000222690 IFFO2Q5TF58 517 aa20.42■□□□□ 0.86
H2AFV-201ENST00000222690 LARP1Q6PKG0 1096 aaKnown RBP20.42■□□□□ 0.86
H2AFV-201ENST00000222690 ADAMTS13Q76LX8 1427 aa20.42■□□□□ 0.86
H2AFV-201ENST00000222690 FAM200AQ8TCP9 573 aa20.42■□□□□ 0.86
H2AFV-201ENST00000222690 KCNF1Q9H3M0 494 aa20.42■□□□□ 0.86
H2AFV-201ENST00000222690 TAF6LQ9Y6J9 622 aa20.42■□□□□ 0.86
H2AFV-201ENST00000222690 RIOK3O14730 519 aaKnown RBP20.41■□□□□ 0.86
H2AFV-201ENST00000222690 LRMPQ12912 555 aa20.41■□□□□ 0.86
H2AFV-201ENST00000222690 BCL2L12Q9HB09 334 aa20.41■□□□□ 0.86
H2AFV-201ENST00000222690 A0A0D9SFI3 127 aa20.41■□□□□ 0.86
H2AFV-201ENST00000222690 MYL6BP14649 208 aa20.41■□□□□ 0.86
H2AFV-201ENST00000222690 EAF2Q96CJ1 260 aaPredicted RBP20.41■□□□□ 0.86
H2AFV-201ENST00000222690 PDCP20941 246 aa20.41■□□□□ 0.86
H2AFV-201ENST00000222690 ST3GAL1Q11201 340 aa20.41■□□□□ 0.86
H2AFV-201ENST00000222690 ERC1Q8IUD2 1116 aa20.41■□□□□ 0.86
H2AFV-201ENST00000222690 LRRC2Q9BYS8 371 aa20.41■□□□□ 0.86
H2AFV-201ENST00000222690 SETD1AO15047 1707 aaKnown RBP20.4■□□□□ 0.86
H2AFV-201ENST00000222690 SLC27A2O14975 620 aa20.4■□□□□ 0.86
H2AFV-201ENST00000222690 ZNF710Q8N1W2 664 aa20.4■□□□□ 0.86
H2AFV-201ENST00000222690 KIAA1524Q8TCG1 905 aa20.4■□□□□ 0.86
H2AFV-201ENST00000222690 RIC3Q7Z5B4 369 aa20.4■□□□□ 0.86
H2AFV-201ENST00000222690 BICC1Q9H694 974 aaKnown RBP20.4■□□□□ 0.86
H2AFV-201ENST00000222690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.4■□□□□ 0.86
H2AFV-201ENST00000222690 NECTIN1Q15223 517 aa20.39■□□□□ 0.86
H2AFV-201ENST00000222690 PDCL2Q8N4E4 241 aa20.39■□□□□ 0.86
H2AFV-201ENST00000222690 NRBP1Q9UHY1 535 aa20.39■□□□□ 0.86
H2AFV-201ENST00000222690 AKAP12Q02952 1782 aa20.39■□□□□ 0.85
H2AFV-201ENST00000222690 KCNA6P17658 529 aa20.39■□□□□ 0.85
H2AFV-201ENST00000222690 DNAJC2Q99543 621 aaKnown RBP20.39■□□□□ 0.85
H2AFV-201ENST00000222690 FUCA2Q9BTY2 467 aa20.39■□□□□ 0.85
H2AFV-201ENST00000222690 DNAJC25Q9H1X3 360 aa20.39■□□□□ 0.85
H2AFV-201ENST00000222690 SUCLG2Q96I99 432 aa20.38■□□□□ 0.85
H2AFV-201ENST00000222690 JAK2O60674 1132 aa20.38■□□□□ 0.85
H2AFV-201ENST00000222690 PSME1Q06323 249 aa20.38■□□□□ 0.85
H2AFV-201ENST00000222690 CBX8Q9HC52 389 aa20.37■□□□□ 0.85
H2AFV-201ENST00000222690 MRVI1Q9Y6F6 885 aa20.37■□□□□ 0.85
H2AFV-201ENST00000222690 PTPRUQ92729 1446 aa20.37■□□□□ 0.85
H2AFV-201ENST00000222690 IL17RAQ96F46 866 aa20.37■□□□□ 0.85
H2AFV-201ENST00000222690 CHMP4AQ9BY43 222 aa20.37■□□□□ 0.85
H2AFV-201ENST00000222690 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
H2AFV-201ENST00000222690 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.37■□□□□ 0.85
H2AFV-201ENST00000222690 IGSF3O75054 1194 aa20.36■□□□□ 0.85
H2AFV-201ENST00000222690 ZNF165P49910 485 aa20.36■□□□□ 0.85
H2AFV-201ENST00000222690 KSR2Q6VAB6 950 aa20.36■□□□□ 0.85
H2AFV-201ENST00000222690 TM6SF1Q9BZW5 370 aa20.36■□□□□ 0.85
H2AFV-201ENST00000222690 ADCY9O60503 1353 aa20.36■□□□□ 0.85
H2AFV-201ENST00000222690 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
H2AFV-201ENST00000222690 ZNF589Q86UQ0 364 aaPredicted RBP20.36■□□□□ 0.85
H2AFV-201ENST00000222690 SCAND2PQ9GZW5 306 aaPredicted RBP20.36■□□□□ 0.85
H2AFV-201ENST00000222690 GRM8O00222 908 aa20.36■□□□□ 0.85
H2AFV-201ENST00000222690 SASH1O94885 1247 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 TPM3P06753 285 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 BABAM1Q9NWV8 329 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 GOLGA6L19H0YKK7 550 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 NR1I2O75469 434 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 ESCO1Q5FWF5 840 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 MAP4K1Q92918 833 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 SPTLC3Q9NUV7 552 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 HIP1O00291 1037 aa20.35■□□□□ 0.85
H2AFV-201ENST00000222690 CHGBP05060 677 aa20.34■□□□□ 0.85
H2AFV-201ENST00000222690 CCDC129Q6ZRS4 1044 aa20.34■□□□□ 0.85
H2AFV-201ENST00000222690 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
H2AFV-201ENST00000222690 U2AF2P26368 475 aaKnown RBP eCLIP20.34■□□□□ 0.852e-8■■■■□ 19.6
H2AFV-201ENST00000222690 SLC39A6Q13433 755 aa20.34■□□□□ 0.85
H2AFV-201ENST00000222690 ANKRD1Q15327 319 aa20.34■□□□□ 0.85
H2AFV-201ENST00000222690 TPD52L1Q16890 204 aaPredicted RBP20.34■□□□□ 0.85
H2AFV-201ENST00000222690 A0A087WWV3 80 aa20.34■□□□□ 0.85
H2AFV-201ENST00000222690 DDX58O95786 925 aaKnown RBP20.34■□□□□ 0.85
H2AFV-201ENST00000222690 LEO1Q8WVC0 666 aaPredicted RBP20.34■□□□□ 0.85
H2AFV-201ENST00000222690 BRF1Q92994 677 aa20.34■□□□□ 0.85
H2AFV-201ENST00000222690 RPS6KB1P23443 525 aa20.33■□□□□ 0.85
H2AFV-201ENST00000222690 CLIP2Q9UDT6 1046 aa20.33■□□□□ 0.85
H2AFV-201ENST00000222690 ATP2B3Q16720 1220 aa20.33■□□□□ 0.84
H2AFV-201ENST00000222690 SMAP1Q8IYB5 467 aaPredicted RBP20.33■□□□□ 0.84
H2AFV-201ENST00000222690 PHF8Q9UPP1 1060 aa20.33■□□□□ 0.84
H2AFV-201ENST00000222690 PLEKHG1Q9ULL1 1385 aa20.33■□□□□ 0.84
H2AFV-201ENST00000222690 GUCY1B3Q02153 619 aa20.32■□□□□ 0.84
H2AFV-201ENST00000222690 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
H2AFV-201ENST00000222690 BECN2A8MW95 431 aa20.32■□□□□ 0.84
H2AFV-201ENST00000222690 TNNT1P13805 278 aa20.32■□□□□ 0.84
H2AFV-201ENST00000222690 FILIP1Q7Z7B0 1213 aa20.32■□□□□ 0.84
H2AFV-201ENST00000222690 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
H2AFV-201ENST00000222690 AGLP35573 1532 aa20.32■□□□□ 0.84
H2AFV-201ENST00000222690 ALDH1L1O75891 902 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms