RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 C1orf167Q5SNV9 1468 aa16.19■□□□□ 0.18
GABPB1-201ENST00000220429 KMT5BQ4FZB7 885 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 TOMM22Q9NS69 142 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 KRT28Q7Z3Y7 464 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 ZNF446Q9NWS9 450 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 MYO1CO00159 1063 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
GABPB1-201ENST00000220429 AKAP4Q5JQC9 854 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
GABPB1-201ENST00000220429 KIF1BPQ96EK5 621 aa16.18■□□□□ 0.18
GABPB1-201ENST00000220429 PXDNLA1KZ92 1463 aa16.17■□□□□ 0.18
GABPB1-201ENST00000220429 SYT10Q6XYQ8 523 aa16.17■□□□□ 0.18
GABPB1-201ENST00000220429 PHAXQ9H814 394 aaKnown RBP16.17■□□□□ 0.18
GABPB1-201ENST00000220429 PXDNQ92626 1479 aa16.17■□□□□ 0.18
GABPB1-201ENST00000220429 CAMTA1Q9Y6Y1 1673 aa16.17■□□□□ 0.18
GABPB1-201ENST00000220429 RBM6P78332 1123 aaKnown RBP16.17■□□□□ 0.18
GABPB1-201ENST00000220429 SATB1Q01826 763 aa16.17■□□□□ 0.18
GABPB1-201ENST00000220429 NFATC2IPQ8NCF5 419 aa16.17■□□□□ 0.18
GABPB1-201ENST00000220429 ANKRD24Q8TF21 1146 aa16.17■□□□□ 0.18
GABPB1-201ENST00000220429 TRIM66O15016 1216 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 KCNQ3O43525 872 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 TPM3P06753 285 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 GNAI3P08754 354 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
GABPB1-201ENST00000220429 SYAP1Q96A49 352 aaPredicted RBP16.16■□□□□ 0.18
GABPB1-201ENST00000220429 KCNF1Q9H3M0 494 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 AXIN2Q9Y2T1 843 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 RAD50Q92878 1312 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 ALS2Q96Q42 1657 aa16.16■□□□□ 0.18
GABPB1-201ENST00000220429 CWC22Q9HCG8 908 aaKnown RBP16.15■□□□□ 0.18
GABPB1-201ENST00000220429 STRCP1A6NGW2 1772 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 PNMA6EA0A0J9YXQ4 647 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
GABPB1-201ENST00000220429 SDSP20132 328 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 AMOTQ4VCS5 1084 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 CCDC112Q8NEF3 446 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 EXOC6BQ9Y2D4 811 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 JRKLQ9Y4A0 524 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 TEFQ10587 303 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 USP44Q9H0E7 712 aa16.14■□□□□ 0.17
GABPB1-201ENST00000220429 HOXB7P09629 217 aa16.13■□□□□ 0.17
GABPB1-201ENST00000220429 TXLNBQ8N3L3 684 aa16.13■□□□□ 0.17
GABPB1-201ENST00000220429 DONSONQ9NYP3 566 aa16.13■□□□□ 0.17
GABPB1-201ENST00000220429 PAXBP1Q9Y5B6 917 aa16.13■□□□□ 0.17
GABPB1-201ENST00000220429 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
GABPB1-201ENST00000220429 TUBGCP6Q96RT7 1819 aa16.13■□□□□ 0.17
GABPB1-201ENST00000220429 MST1RQ04912 1400 aa16.13■□□□□ 0.17
GABPB1-201ENST00000220429 BTBD11A6QL63 1104 aa16.13■□□□□ 0.17
GABPB1-201ENST00000220429 RNMTO43148 476 aaKnown RBP16.12■□□□□ 0.17
GABPB1-201ENST00000220429 HSP90AB3PQ58FF7 597 aa16.12■□□□□ 0.17
GABPB1-201ENST00000220429 GOLGA6L1Q8N7Z2 621 aa16.12■□□□□ 0.17
GABPB1-201ENST00000220429 SIPA1L3O60292 1781 aaPredicted RBP16.12■□□□□ 0.17
GABPB1-201ENST00000220429 KRBA2Q6ZNG9 492 aa16.12■□□□□ 0.17
GABPB1-201ENST00000220429 DRC1Q96MC2 740 aa16.12■□□□□ 0.17
GABPB1-201ENST00000220429 OSBPL3Q9H4L5 887 aa16.12■□□□□ 0.17
GABPB1-201ENST00000220429 CHPF2Q9P2E5 772 aa16.12■□□□□ 0.17
GABPB1-201ENST00000220429 CHAMP1Q96JM3 812 aa16.11■□□□□ 0.17
GABPB1-201ENST00000220429 LCMT1Q9UIC8 334 aa16.11■□□□□ 0.17
GABPB1-201ENST00000220429 ZDHHC9Q9Y397 364 aa16.11■□□□□ 0.17
GABPB1-201ENST00000220429 PDE1AP54750 535 aa16.11■□□□□ 0.17
GABPB1-201ENST00000220429 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
GABPB1-201ENST00000220429 NEK11Q8NG66 645 aa16.11■□□□□ 0.17
GABPB1-201ENST00000220429 SALL3Q9BXA9 1300 aa16.11■□□□□ 0.17
GABPB1-201ENST00000220429 OVOS2A0A0G2JMS6 1433 aa16.11■□□□□ 0.17
GABPB1-201ENST00000220429 KDM4AO75164 1064 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 MCCP23508 829 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 FBXO38Q6PIJ6 1188 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 ZC3H6P61129 1189 aaKnown RBP16.1■□□□□ 0.17
GABPB1-201ENST00000220429 C16orf45Q96MC5 204 aaPredicted RBP16.1■□□□□ 0.17
GABPB1-201ENST00000220429 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 ERBB3P21860 1342 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 ANXA1P04083 346 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 UBTFL1P0CB47 393 aaPredicted RBP16.1■□□□□ 0.17
GABPB1-201ENST00000220429 BMS1Q14692 1282 aaKnown RBP16.1■□□□□ 0.17
GABPB1-201ENST00000220429 TEX35Q5T0J7 233 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 FAM43BQ6ZT52 329 aaPredicted RBP16.1■□□□□ 0.17
GABPB1-201ENST00000220429 USP26Q9BXU7 913 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
GABPB1-201ENST00000220429 TNNT1P13805 278 aa16.09■□□□□ 0.17
GABPB1-201ENST00000220429 NBPF20Q3BBV1 942 aa16.09■□□□□ 0.17
GABPB1-201ENST00000220429 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
GABPB1-201ENST00000220429 SRCIN1Q9C0H9 1055 aa16.09■□□□□ 0.17
GABPB1-201ENST00000220429 ADAMTS7Q9UKP4 1686 aa16.09■□□□□ 0.17
GABPB1-201ENST00000220429 A0A1B0GUL7 405 aa16.09■□□□□ 0.17
GABPB1-201ENST00000220429 KIF1CO43896 1103 aaKnown RBP16.08■□□□□ 0.16
GABPB1-201ENST00000220429 SLFNL1Q499Z3 407 aa16.08■□□□□ 0.16
GABPB1-201ENST00000220429 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
GABPB1-201ENST00000220429 CXorf56Q9H5V9 222 aa16.08■□□□□ 0.16
GABPB1-201ENST00000220429 PI4KAP2A4QPH2 592 aa16.08■□□□□ 0.16
GABPB1-201ENST00000220429 ATF3P18847 181 aa16.08■□□□□ 0.16
GABPB1-201ENST00000220429 RABEP1Q15276 862 aa16.08■□□□□ 0.16
GABPB1-201ENST00000220429 TSHZ3Q63HK5 1081 aa16.08■□□□□ 0.16
GABPB1-201ENST00000220429 PI4KAP1Q8N8J0 262 aa16.08■□□□□ 0.16
GABPB1-201ENST00000220429 CWC15Q9P013 229 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms