RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SKILP12757 684 aa23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 SCAND2PQ9GZW5 306 aaPredicted RBP23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 PPP6R1Q9UPN7 881 aa23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 NMIQ13287 307 aaPredicted RBP23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 FSD1Q9BTV5 496 aa23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 ST7Q9NRC1 585 aa23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 ECHDC1Q9NTX5 307 aa23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 AOX1Q06278 1338 aa23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 PDCP20941 246 aa23.72■■□□□ 1.39
PPP1R3F-201ENST00000055335 ELF2Q15723 593 aa23.71■■□□□ 1.39
PPP1R3F-201ENST00000055335 GPATCH3Q96I76 525 aa23.71■■□□□ 1.39
PPP1R3F-201ENST00000055335 VGLL3A8MV65 326 aa23.71■■□□□ 1.39
PPP1R3F-201ENST00000055335 PAXBP1Q9Y5B6 917 aa23.71■■□□□ 1.39
PPP1R3F-201ENST00000055335 CCDC171Q6TFL3 1326 aa23.7■■□□□ 1.39
PPP1R3F-201ENST00000055335 GORABQ5T7V8 394 aa23.7■■□□□ 1.38
PPP1R3F-201ENST00000055335 FMNL2Q96PY5 1086 aa23.7■■□□□ 1.38
PPP1R3F-201ENST00000055335 FTOQ9C0B1 505 aaKnown RBP eCLIP23.7■■□□□ 1.38
PPP1R3F-201ENST00000055335 DDX19AQ9NUU7 478 aaKnown RBP23.7■■□□□ 1.38
PPP1R3F-201ENST00000055335 CDK11BP21127 795 aaKnown RBP23.69■■□□□ 1.38
PPP1R3F-201ENST00000055335 DNAAF4Q8WXU2 420 aa23.69■■□□□ 1.38
PPP1R3F-201ENST00000055335 PGBD1Q96JS3 809 aa23.69■■□□□ 1.38
PPP1R3F-201ENST00000055335 NPHP3Q7Z494 1330 aa23.69■■□□□ 1.38
PPP1R3F-201ENST00000055335 EDC3Q96F86 508 aaKnown RBP23.69■■□□□ 1.38
PPP1R3F-201ENST00000055335 CLSTN2Q9H4D0 955 aa23.69■■□□□ 1.38
PPP1R3F-201ENST00000055335 DDX41Q9UJV9 622 aaKnown RBP23.69■■□□□ 1.38
PPP1R3F-201ENST00000055335 NLRP6P59044 892 aa23.68■■□□□ 1.38
PPP1R3F-201ENST00000055335 SLC27A2O14975 620 aa23.68■■□□□ 1.38
PPP1R3F-201ENST00000055335 C11orf57Q6ZUT1 292 aaPredicted RBP23.68■■□□□ 1.38
PPP1R3F-201ENST00000055335 NDUFB9Q9Y6M9 179 aa23.68■■□□□ 1.38
PPP1R3F-201ENST00000055335 PSMA5P28066 241 aa23.68■■□□□ 1.38
PPP1R3F-201ENST00000055335 KMT5BQ4FZB7 885 aa23.68■■□□□ 1.38
PPP1R3F-201ENST00000055335 KIF18AQ8NI77 898 aa23.68■■□□□ 1.38
PPP1R3F-201ENST00000055335 GUCY1B3Q02153 619 aa23.67■■□□□ 1.38
PPP1R3F-201ENST00000055335 NECTIN1Q15223 517 aa23.67■■□□□ 1.38
PPP1R3F-201ENST00000055335 HSP90AB4PQ58FF6 505 aa23.67■■□□□ 1.38
PPP1R3F-201ENST00000055335 PLA2G4DQ86XP0 818 aa23.67■■□□□ 1.38
PPP1R3F-201ENST00000055335 BRF1Q92994 677 aa23.67■■□□□ 1.38
PPP1R3F-201ENST00000055335 ESF1Q9H501 851 aaKnown RBP23.67■■□□□ 1.38
PPP1R3F-201ENST00000055335 KCNQ3O43525 872 aa23.67■■□□□ 1.38
PPP1R3F-201ENST00000055335 AIMP1Q12904 312 aaKnown RBP23.66■■□□□ 1.38
PPP1R3F-201ENST00000055335 POLA2Q14181 598 aa23.66■■□□□ 1.38
PPP1R3F-201ENST00000055335 LRRC8AQ8IWT6 810 aa23.66■■□□□ 1.38
PPP1R3F-201ENST00000055335 CCDC69A6NI79 296 aa23.66■■□□□ 1.38
PPP1R3F-201ENST00000055335 CWF19L2Q2TBE0 894 aaKnown RBP23.66■■□□□ 1.38
PPP1R3F-201ENST00000055335 A0A0D9SFI3 127 aa23.66■■□□□ 1.38
PPP1R3F-201ENST00000055335 KRT222Q8N1A0 295 aa23.66■■□□□ 1.38
PPP1R3F-201ENST00000055335 KLHDC4Q8TBB5 520 aa23.65■■□□□ 1.38
PPP1R3F-201ENST00000055335 IL17RAQ96F46 866 aa23.65■■□□□ 1.38
PPP1R3F-201ENST00000055335 EPB41L2O43491 1005 aaKnown RBP23.65■■□□□ 1.38
PPP1R3F-201ENST00000055335 RNF20Q5VTR2 975 aa23.64■■□□□ 1.38
PPP1R3F-201ENST00000055335 TDRD7Q8NHU6 1098 aaKnown RBP23.64■■□□□ 1.38
PPP1R3F-201ENST00000055335 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.38
PPP1R3F-201ENST00000055335 FBXO38Q6PIJ6 1188 aa23.64■■□□□ 1.37
PPP1R3F-201ENST00000055335 EVI5LQ96CN4 794 aa23.64■■□□□ 1.37
PPP1R3F-201ENST00000055335 TLR7Q9NYK1 1049 aaKnown RBP23.64■■□□□ 1.37
PPP1R3F-201ENST00000055335 SLFN14P0C7P3 912 aa23.63■■□□□ 1.37
PPP1R3F-201ENST00000055335 GTF3C6Q969F1 213 aa23.63■■□□□ 1.37
PPP1R3F-201ENST00000055335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.63■■□□□ 1.37
PPP1R3F-201ENST00000055335 ZBTB9Q96C00 473 aa23.63■■□□□ 1.37
PPP1R3F-201ENST00000055335 TMEM131LA2VDJ0 1609 aa23.63■■□□□ 1.37
PPP1R3F-201ENST00000055335 CLTCQ00610 1675 aaKnown RBP23.62■■□□□ 1.37
PPP1R3F-201ENST00000055335 G3BP1Q13283 466 aaKnown RBP eCLIP23.62■■□□□ 1.37
PPP1R3F-201ENST00000055335 CCAR1Q8IX12 1150 aaKnown RBP23.62■■□□□ 1.37
PPP1R3F-201ENST00000055335 TM6SF1Q9BZW5 370 aa23.62■■□□□ 1.37
PPP1R3F-201ENST00000055335 CHGBP05060 677 aa23.62■■□□□ 1.37
PPP1R3F-201ENST00000055335 LGR6Q9HBX8 967 aa23.62■■□□□ 1.37
PPP1R3F-201ENST00000055335 ZNF589Q86UQ0 364 aaPredicted RBP23.61■■□□□ 1.37
PPP1R3F-201ENST00000055335 ZNF397Q8NF99 534 aaPredicted RBP23.61■■□□□ 1.37
PPP1R3F-201ENST00000055335 TTC41PQ6P2S7 1318 aa23.61■■□□□ 1.37
PPP1R3F-201ENST00000055335 ZRSR1Q15695 479 aaKnown RBP23.61■■□□□ 1.37
PPP1R3F-201ENST00000055335 BEND3Q5T5X7 828 aa23.61■■□□□ 1.37
PPP1R3F-201ENST00000055335 AOPEPQ8N6M6 819 aa23.61■■□□□ 1.37
PPP1R3F-201ENST00000055335 SMC2O95347 1197 aa23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 TERF2Q15554 542 aa23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 ELP1O95163 1332 aa23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 RPS6KB1P23443 525 aa23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 ME1P48163 572 aa23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 GABPB1Q06547 395 aaPredicted RBP23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 ERCC6LQ2NKX8 1250 aa23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 CCDC73Q6ZRK6 1079 aa23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 EAF2Q96CJ1 260 aaPredicted RBP23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 MAP3K2Q9Y2U5 619 aa23.6■■□□□ 1.37
PPP1R3F-201ENST00000055335 CCT2P78371 535 aaKnown RBP23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 TOB2Q14106 344 aaPredicted RBP23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 MAP4K1Q92918 833 aa23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 SDF4Q9BRK5 362 aa23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 KINO60870 393 aaKnown RBP23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 CCDC129Q6ZRS4 1044 aa23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 HOMER1Q86YM7 354 aa23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
PPP1R3F-201ENST00000055335 BIN1O00499 593 aa23.58■■□□□ 1.37
PPP1R3F-201ENST00000055335 ANKRD1Q15327 319 aa23.58■■□□□ 1.37
PPP1R3F-201ENST00000055335 ISM2Q6H9L7 571 aa23.58■■□□□ 1.37
PPP1R3F-201ENST00000055335 HTATSF1O43719 755 aaKnown RBP23.58■■□□□ 1.36
PPP1R3F-201ENST00000055335 TEFQ10587 303 aa23.58■■□□□ 1.36
PPP1R3F-201ENST00000055335 Q6ZUG5 572 aa23.58■■□□□ 1.36
PPP1R3F-201ENST00000055335 MORC2Q9Y6X9 1032 aaPredicted RBP23.58■■□□□ 1.36
PPP1R3F-201ENST00000055335 SYT10Q6XYQ8 523 aa23.57■■□□□ 1.36
PPP1R3F-201ENST00000055335 DNAJC2Q99543 621 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms