RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
HOXA11-201ENST00000006015 LRMPQ12912 555 aa23.33■■□□□ 1.33
HOXA11-201ENST00000006015 PLA2G4DQ86XP0 818 aa23.33■■□□□ 1.33
HOXA11-201ENST00000006015 LARP6Q9BRS8 491 aaKnown RBP23.33■■□□□ 1.33
HOXA11-201ENST00000006015 CCDC171Q6TFL3 1326 aa23.33■■□□□ 1.33
HOXA11-201ENST00000006015 BTBD11A6QL63 1104 aa23.33■■□□□ 1.32
HOXA11-201ENST00000006015 PDIA4P13667 645 aaKnown RBP23.33■■□□□ 1.32
HOXA11-201ENST00000006015 CASTP20810 708 aaKnown RBP23.33■■□□□ 1.32
HOXA11-201ENST00000006015 ZNF75DP51815 510 aa23.33■■□□□ 1.32
HOXA11-201ENST00000006015 KRT85P78386 507 aa23.33■■□□□ 1.32
HOXA11-201ENST00000006015 TEFQ10587 303 aa23.33■■□□□ 1.32
HOXA11-201ENST00000006015 ANKRD24Q8TF21 1146 aa23.33■■□□□ 1.32
HOXA11-201ENST00000006015 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
HOXA11-201ENST00000006015 CRYBG1Q9Y4K1 1723 aa23.32■■□□□ 1.32
HOXA11-201ENST00000006015 VPS37CA5D8V6 355 aaPredicted RBP23.32■■□□□ 1.32
HOXA11-201ENST00000006015 RAB11FIP3O75154 756 aa23.32■■□□□ 1.32
HOXA11-201ENST00000006015 VPS53Q5VIR6 699 aa23.32■■□□□ 1.32
HOXA11-201ENST00000006015 CNTROBQ8N137 903 aa23.32■■□□□ 1.32
HOXA11-201ENST00000006015 PI4K2BQ8TCG2 481 aa23.32■■□□□ 1.32
HOXA11-201ENST00000006015 DDX17Q92841 729 aaKnown RBP23.32■■□□□ 1.32
HOXA11-201ENST00000006015 PXDNLA1KZ92 1463 aa23.32■■□□□ 1.32
HOXA11-201ENST00000006015 KRT28Q7Z3Y7 464 aa23.31■■□□□ 1.32
HOXA11-201ENST00000006015 KIF18AQ8NI77 898 aa23.31■■□□□ 1.32
HOXA11-201ENST00000006015 CBX8Q9HC52 389 aa23.31■■□□□ 1.32
HOXA11-201ENST00000006015 IL1RAPL2Q9NP60 686 aa23.31■■□□□ 1.32
HOXA11-201ENST00000006015 SLFN14P0C7P3 912 aa23.31■■□□□ 1.32
HOXA11-201ENST00000006015 NUTM1Q86Y26 1132 aa23.31■■□□□ 1.32
HOXA11-201ENST00000006015 UBTFL1P0CB47 393 aaPredicted RBP23.3■■□□□ 1.32
HOXA11-201ENST00000006015 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
HOXA11-201ENST00000006015 PLEKHO1Q53GL0 409 aaPredicted RBP23.3■■□□□ 1.32
HOXA11-201ENST00000006015 AKAP4Q5JQC9 854 aa23.3■■□□□ 1.32
HOXA11-201ENST00000006015 TTC6Q86TZ1 520 aa23.3■■□□□ 1.32
HOXA11-201ENST00000006015 TDRD7Q8NHU6 1098 aaKnown RBP23.3■■□□□ 1.32
HOXA11-201ENST00000006015 BBXQ8WY36 941 aaPredicted RBP23.3■■□□□ 1.32
HOXA11-201ENST00000006015 ANO6Q4KMQ2 910 aa23.3■■□□□ 1.32
HOXA11-201ENST00000006015 TRIM5Q9C035 493 aa23.3■■□□□ 1.32
HOXA11-201ENST00000006015 TNMDQ9H2S6 317 aa23.3■■□□□ 1.32
HOXA11-201ENST00000006015 ADAMTSL3P82987 1691 aa23.29■■□□□ 1.32
HOXA11-201ENST00000006015 PI4KAP2A4QPH2 592 aa23.29■■□□□ 1.32
HOXA11-201ENST00000006015 MAP4K4O95819 1239 aaPredicted RBP23.29■■□□□ 1.32
HOXA11-201ENST00000006015 TPD52L1Q16890 204 aaPredicted RBP23.29■■□□□ 1.32
HOXA11-201ENST00000006015 PI4KAP1Q8N8J0 262 aa23.29■■□□□ 1.32
HOXA11-201ENST00000006015 PDRG1Q9NUG6 133 aa23.29■■□□□ 1.32
HOXA11-201ENST00000006015 PRAMEF22A3QJZ6 481 aa23.29■■□□□ 1.32
HOXA11-201ENST00000006015 LIG1P18858 919 aa23.29■■□□□ 1.32
HOXA11-201ENST00000006015 KRT222Q8N1A0 295 aa23.29■■□□□ 1.32
HOXA11-201ENST00000006015 ZNF397Q8NF99 534 aaPredicted RBP23.29■■□□□ 1.32
HOXA11-201ENST00000006015 SSH3Q8TE77 659 aa23.29■■□□□ 1.32
HOXA11-201ENST00000006015 DDX19AQ9NUU7 478 aaKnown RBP23.29■■□□□ 1.32
HOXA11-201ENST00000006015 PXDNQ92626 1479 aa23.28■■□□□ 1.32
HOXA11-201ENST00000006015 NBPF7P0C2Y1 421 aaPredicted RBP23.28■■□□□ 1.32
HOXA11-201ENST00000006015 TM6SF1Q9BZW5 370 aa23.28■■□□□ 1.32
HOXA11-201ENST00000006015 NRBP1Q9UHY1 535 aa23.28■■□□□ 1.32
HOXA11-201ENST00000006015 CCDC66A2RUB6 948 aa23.28■■□□□ 1.32
HOXA11-201ENST00000006015 RNMTO43148 476 aaKnown RBP23.28■■□□□ 1.32
HOXA11-201ENST00000006015 GTF2E1P29083 439 aaPredicted RBP23.28■■□□□ 1.32
HOXA11-201ENST00000006015 CAMK4Q16566 473 aa23.28■■□□□ 1.32
HOXA11-201ENST00000006015 RBM43Q6ZSC3 357 aaKnown RBP23.28■■□□□ 1.32
HOXA11-201ENST00000006015 CACNA1FO60840 1977 aa23.27■■□□□ 1.32
HOXA11-201ENST00000006015 CDC25BP30305 580 aa23.27■■□□□ 1.32
HOXA11-201ENST00000006015 CEP135Q66GS9 1140 aa23.27■■□□□ 1.32
HOXA11-201ENST00000006015 CYP46A1Q9Y6A2 500 aa23.27■■□□□ 1.32
HOXA11-201ENST00000006015 CPA1P15085 419 aa23.26■■□□□ 1.31
HOXA11-201ENST00000006015 TERF2Q15554 542 aa23.26■■□□□ 1.31
HOXA11-201ENST00000006015 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
HOXA11-201ENST00000006015 PPP1R42Q7Z4L9 355 aa23.26■■□□□ 1.31
HOXA11-201ENST00000006015 JAKMIP1Q96N16 626 aaKnown RBP23.26■■□□□ 1.31
HOXA11-201ENST00000006015 NAA30Q147X3 362 aaPredicted RBP23.25■■□□□ 1.31
HOXA11-201ENST00000006015 CWC27Q6UX04 472 aaKnown RBP23.25■■□□□ 1.31
HOXA11-201ENST00000006015 ZSWIM6Q9HCJ5 1215 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 CLIP2Q9UDT6 1046 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 ST3GAL1Q11201 340 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 PROSER3Q2NL68 480 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 CKAP2LQ8IYA6 745 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 RHPN1Q8TCX5 695 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 SCAND2PQ9GZW5 306 aaPredicted RBP23.25■■□□□ 1.31
HOXA11-201ENST00000006015 CLSTN2Q9H4D0 955 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 DACT1Q9NYF0 836 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
HOXA11-201ENST00000006015 PDCP20941 246 aa23.24■■□□□ 1.31
HOXA11-201ENST00000006015 CACTINQ8WUQ7 758 aaKnown RBP23.24■■□□□ 1.31
HOXA11-201ENST00000006015 RUFY2Q8WXA3 655 aa23.24■■□□□ 1.31
HOXA11-201ENST00000006015 TMEM51Q9NW97 253 aa23.24■■□□□ 1.31
HOXA11-201ENST00000006015 CHMP3Q9Y3E7 222 aa23.24■■□□□ 1.31
HOXA11-201ENST00000006015 NPHP3Q7Z494 1330 aa23.24■■□□□ 1.31
HOXA11-201ENST00000006015 AMOTQ4VCS5 1084 aa23.24■■□□□ 1.31
HOXA11-201ENST00000006015 LARP1BQ659C4 914 aaKnown RBP23.24■■□□□ 1.31
HOXA11-201ENST00000006015 KCNB2Q92953 911 aa23.24■■□□□ 1.31
HOXA11-201ENST00000006015 KIF1BPQ96EK5 621 aa23.24■■□□□ 1.31
HOXA11-201ENST00000006015 GOLGA6L4A6NEF3 574 aa23.23■■□□□ 1.31
HOXA11-201ENST00000006015 NEMFO60524 1076 aa23.23■■□□□ 1.31
HOXA11-201ENST00000006015 SURF6O75683 361 aaKnown RBP23.23■■□□□ 1.31
HOXA11-201ENST00000006015 CAVIN2O95810 425 aa23.23■■□□□ 1.31
HOXA11-201ENST00000006015 BEND3Q5T5X7 828 aa23.23■■□□□ 1.31
HOXA11-201ENST00000006015 DNAAF4Q8WXU2 420 aa23.23■■□□□ 1.31
HOXA11-201ENST00000006015 FAM193AP78312 1265 aa23.22■■□□□ 1.31
HOXA11-201ENST00000006015 POLA2Q14181 598 aa23.22■■□□□ 1.31
HOXA11-201ENST00000006015 ME3Q16798 604 aa23.22■■□□□ 1.31
HOXA11-201ENST00000006015 CDC37L1Q7L3B6 337 aa23.22■■□□□ 1.31
HOXA11-201ENST00000006015 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms