RNA–Protein interactions for RNA: ENSMUST00000200038.1

Chfr-212, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

TSL 1 (best) BASIC

Gene Chfr, Length 606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-212ENSMUST00000200038 Dydc2Q9D3X8 139 aa16.61■□□□□ 0.25
Chfr-212ENSMUST00000200038 MypnQ5DTJ9 1315 aa16.61■□□□□ 0.25
Chfr-212ENSMUST00000200038 Csf1rP09581 977 aa16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 Rangap1P46061 589 aaKnown RBP16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 Aplp1Q03157 653 aa16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 BcanQ61361 883 aa16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 Rtn4Q99P72 1162 aaKnown RBP16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 Fam213aQ9CYH2 218 aa16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 Ppp1r3fQ9JIG4 799 aa16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 Mybbp1aQ7TPV4 1344 aaKnown RBP16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 Flt4P35917 1363 aa16.6■□□□□ 0.25
Chfr-212ENSMUST00000200038 Exoc6bA6H5Z3 810 aa16.59■□□□□ 0.25
Chfr-212ENSMUST00000200038 Trim34bJ3QNR8 485 aa16.59■□□□□ 0.25
Chfr-212ENSMUST00000200038 Chl1P70232 1209 aa16.59■□□□□ 0.25
Chfr-212ENSMUST00000200038 Ccdc30Q8BVF4 654 aa16.59■□□□□ 0.25
Chfr-212ENSMUST00000200038 Polr3glQ8R0C0 218 aa16.59■□□□□ 0.25
Chfr-212ENSMUST00000200038 Sf3b3Q921M3 1217 aaKnown RBP16.59■□□□□ 0.25
Chfr-212ENSMUST00000200038 Glt1d1A4FUP9 346 aa16.58■□□□□ 0.24
Chfr-212ENSMUST00000200038 Vsig10D3YX43 558 aa16.58■□□□□ 0.24
Chfr-212ENSMUST00000200038 Eif6O55135 245 aa16.58■□□□□ 0.24
Chfr-212ENSMUST00000200038 Rbm46P86049 533 aa16.58■□□□□ 0.24
Chfr-212ENSMUST00000200038 Gpr101Q80T62 511 aa16.58■□□□□ 0.24
Chfr-212ENSMUST00000200038 Ccar1Q8CH18 1146 aaKnown RBP16.58■□□□□ 0.24
Chfr-212ENSMUST00000200038 Ehd4Q9EQP2 541 aa16.58■□□□□ 0.24
Chfr-212ENSMUST00000200038 Adarb2Q9JI20 745 aa16.58■□□□□ 0.24
Chfr-212ENSMUST00000200038 Itgb4A2A863 1818 aa16.57■□□□□ 0.24
Chfr-212ENSMUST00000200038 Oas2E9Q9A9 742 aa16.57■□□□□ 0.24
Chfr-212ENSMUST00000200038 PnnO35691 725 aaKnown RBP16.57■□□□□ 0.24
Chfr-212ENSMUST00000200038 Atp6v1aP50516 617 aaKnown RBP16.57■□□□□ 0.24
Chfr-212ENSMUST00000200038 Insm1Q63ZV0 521 aa16.57■□□□□ 0.24
Chfr-212ENSMUST00000200038 Ppm1mQ8BU27 406 aa16.57■□□□□ 0.24
Chfr-212ENSMUST00000200038 KarsQ99MN1 595 aaKnown RBP16.57■□□□□ 0.24
Chfr-212ENSMUST00000200038 Kif13bA0A286YCV9 1847 aa16.56■□□□□ 0.24
Chfr-212ENSMUST00000200038 Zfp831A2ADM8 1628 aa16.56■□□□□ 0.24
Chfr-212ENSMUST00000200038 Col5a2Q3U962 1497 aa16.56■□□□□ 0.24
Chfr-212ENSMUST00000200038 Cyp2d11P24457 504 aa16.56■□□□□ 0.24
Chfr-212ENSMUST00000200038 Lrch1P62046 709 aa16.56■□□□□ 0.24
Chfr-212ENSMUST00000200038 Mphosph10Q810V0 681 aaKnown RBP16.56■□□□□ 0.24
Chfr-212ENSMUST00000200038 Clca2Q8BG22 942 aa16.56■□□□□ 0.24
Chfr-212ENSMUST00000200038 Col4a5Q63ZW6 1691 aa16.56■□□□□ 0.24
Chfr-212ENSMUST00000200038 Rps8P62242 208 aaKnown RBP16.55■□□□□ 0.24
Chfr-212ENSMUST00000200038 Ccdc60Q8C4J0 545 aa16.55■□□□□ 0.24
Chfr-212ENSMUST00000200038 Myoz2Q9JJW5 264 aa16.55■□□□□ 0.24
Chfr-212ENSMUST00000200038 NmiO35309 314 aa16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Chrna5Q2MKA5 467 aa16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Zbtb38Q3LR78 1197 aa16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Stxbp5lQ5DQR4 1185 aa16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Nol10Q5RJG1 687 aaKnown RBP16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Tom1l2Q5SRX1 507 aa16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Smc4Q8CG47 1286 aa16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Kif2cQ922S8 721 aa16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Naa16Q9DBB4 864 aa16.54■□□□□ 0.24
Chfr-212ENSMUST00000200038 Myo3bQ1EG27 1305 aa16.53■□□□□ 0.24
Chfr-212ENSMUST00000200038 Dcdc2bF7BCK0 340 aa16.53■□□□□ 0.24
Chfr-212ENSMUST00000200038 Map9Q3TRR0 646 aa16.53■□□□□ 0.24
Chfr-212ENSMUST00000200038 Pcsk7Q61139 770 aa16.53■□□□□ 0.24
Chfr-212ENSMUST00000200038 Tmco5bQ80X59 307 aa16.53■□□□□ 0.24
Chfr-212ENSMUST00000200038 Glis2Q8VDL9 521 aa16.53■□□□□ 0.24
Chfr-212ENSMUST00000200038 Lmbr1lQ9D1E5 489 aa16.53■□□□□ 0.24
Chfr-212ENSMUST00000200038 Dpp7Q9ET22 506 aa16.53■□□□□ 0.24
Chfr-212ENSMUST00000200038 Slc4a9E9PUP3 929 aa16.52■□□□□ 0.24
Chfr-212ENSMUST00000200038 Eddm13E9Q7F5 164 aa16.52■□□□□ 0.24
Chfr-212ENSMUST00000200038 Cfdp1O88271 295 aaKnown RBP16.52■□□□□ 0.24
Chfr-212ENSMUST00000200038 HellsQ60848 821 aa16.52■□□□□ 0.24
Chfr-212ENSMUST00000200038 Ripor2Q80U16 1078 aa16.52■□□□□ 0.24
Chfr-212ENSMUST00000200038 Sall2Q9QX96 1004 aa16.52■□□□□ 0.24
Chfr-212ENSMUST00000200038 Dlg5E9Q9R9 1921 aa16.52■□□□□ 0.23
Chfr-212ENSMUST00000200038 Setdb1O88974 1307 aa16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 Zdbf2Q5SS00 2493 aaKnown RBP16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 G3bp1P97855 465 aaKnown RBP16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 SobpQ0P5V2 864 aa16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 VeztQ3ZK22 780 aa16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 NexnQ7TPW1 607 aa16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 Ubxn2aQ99KJ0 258 aa16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 Gdf11Q9Z1W4 405 aa16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 Kank1E9Q238 1360 aa16.51■□□□□ 0.23
Chfr-212ENSMUST00000200038 Ccdc171E9Q1U1 1324 aa16.5■□□□□ 0.23
Chfr-212ENSMUST00000200038 Plcb3P51432 1234 aaKnown RBP16.5■□□□□ 0.23
Chfr-212ENSMUST00000200038 Gas2l2Q5SSG4 860 aa16.5■□□□□ 0.23
Chfr-212ENSMUST00000200038 NfixP70257 488 aa16.49■□□□□ 0.23
Chfr-212ENSMUST00000200038 Map3k13Q1HKZ5 959 aa16.49■□□□□ 0.23
Chfr-212ENSMUST00000200038 Plekhm2Q80TQ5 1018 aa16.49■□□□□ 0.23
Chfr-212ENSMUST00000200038 Tnip1Q9WUU8 647 aa16.49■□□□□ 0.23
Chfr-212ENSMUST00000200038 Map3k15A2AQW0 1331 aa16.48■□□□□ 0.23
Chfr-212ENSMUST00000200038 Nectin2P32507 530 aa16.48■□□□□ 0.23
Chfr-212ENSMUST00000200038 Psmd1Q3TXS7 953 aa16.48■□□□□ 0.23
Chfr-212ENSMUST00000200038 Ddx46Q569Z5 1032 aaKnown RBP16.48■□□□□ 0.23
Chfr-212ENSMUST00000200038 Ccdc93Q7TQK5 629 aa16.48■□□□□ 0.23
Chfr-212ENSMUST00000200038 Podxl2Q8CAE9 603 aa16.48■□□□□ 0.23
Chfr-212ENSMUST00000200038 Cdca7Q9D0M2 382 aa16.48■□□□□ 0.23
Chfr-212ENSMUST00000200038 Znf609Q8BZ47 1413 aa16.47■□□□□ 0.23
Chfr-212ENSMUST00000200038 Zap70P43404 618 aa16.47■□□□□ 0.23
Chfr-212ENSMUST00000200038 Itga6Q61739 1091 aa16.47■□□□□ 0.23
Chfr-212ENSMUST00000200038 Cavin2Q63918 418 aaKnown RBP16.47■□□□□ 0.23
Chfr-212ENSMUST00000200038 Best3Q6H1V1 669 aa16.47■□□□□ 0.23
Chfr-212ENSMUST00000200038 Bend3Q6PAL0 825 aa16.47■□□□□ 0.23
Chfr-212ENSMUST00000200038 Plekhg6Q8R0J1 787 aa16.47■□□□□ 0.23
Chfr-212ENSMUST00000200038 Slfn1Q9Z0I7 337 aa16.47■□□□□ 0.23
Chfr-212ENSMUST00000200038 Sipa1l3G3X9J0 1776 aa16.46■□□□□ 0.23
Chfr-212ENSMUST00000200038 BcorQ8CGN4 1759 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms