RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Ccdc57Q6PHN1 1016 aa16.06■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Stx6Q9JKK1 255 aa16.06■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Cage1Q5IR70 849 aa16.06■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Ccdc122Q8BVN0 290 aa16.06■□□□□ 0.16
Col7a1-202ENSMUST00000112070 PrphP15331 475 aa16.06■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Atp2a1Q8R429 994 aa16.06■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Znf653Q6YND2 615 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Micall1Q8BGT6 870 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Atf7Q8R0S1 413 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Psmd1Q3TXS7 953 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Haus1Q8BHX1 278 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Btbd11Q6GQW0 1109 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Eps15P42567 897 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Arhgef6Q8K4I3 771 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Epb41l3Q9WV92 929 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Sec62Q8BU14 398 aaKnown RBP16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Speer3W4VSP1 261 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Aldh1l1Q8R0Y6 902 aa16.05■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Gbp6A0A0G2JDV3 611 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Gm43302L7N1X8 611 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Clasp2Q8BRT1 1286 aaKnown RBP16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 LrpprcQ6PB66 1392 aaKnown RBP16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Atp8b3Q6UQ17 1335 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Rnf216P58283 853 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Agbl1Q09M05 972 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Pym1Q8CHP5 203 aaKnown RBP16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Synpo2Q91YE8 1087 aaKnown RBP16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 JmyQ9QXM1 983 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Krt90E9Q1Z0 538 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Naa25Q8BWZ3 972 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Efhd1Q9D4J1 240 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Vps18Q8R307 973 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 4930548H24RikQ9D496 437 aa16.04■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Serpinb6bO08804 377 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 EnahQ03173 802 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Plekhg5Q66T02 1073 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Arhgef5E9Q7D5 1581 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 TchhA0A0B4J1F9 1599 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 CebpzP53569 1052 aaKnown RBP16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Ddx27Q921N6 760 aaKnown RBP16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Ccdc14Q8K2J4 934 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Mcm5P49718 733 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Ms4a1P19437 291 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Smarcc2Q6PDG5 1213 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Srgap1Q91Z69 1062 aa16.03■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Senp1P59110 640 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Actr5Q80US4 605 aaKnown RBP16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Homer2Q9QWW1 354 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Arhgap31A6X8Z5 1425 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Myo6Q64331 1265 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Usp5P56399 858 aaKnown RBP16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Sec63Q8VHE0 760 aaKnown RBP16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Fkbp4P30416 458 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Mcm6P97311 821 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Cracr2aQ3UP38 310 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Dennd6aQ8BH65 605 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Suds3Q8BR65 328 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Ankrd49Q8VE42 238 aa16.02■□□□□ 0.16
Col7a1-202ENSMUST00000112070 Tmem87bQ8BKU8 555 aa16.02■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Actn2Q9JI91 894 aa16.02■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Apol7bB1AQP7 369 aa16.02■□□□□ 0.15
Col7a1-202ENSMUST00000112070 SbdsP70122 250 aa16.02■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Map4k4P97820 1233 aaKnown RBP16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Ift88Q61371 824 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Eif3bQ8JZQ9 803 aaKnown RBP16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Fam186bD3Z420 943 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Tsga10Q6NY15 697 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Egfl6Q9JJZ5 550 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Krt77Q6IFZ6 572 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Ccdc25Q78PG9 208 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Arl1P61211 181 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Znf692Q3U381 531 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Matr3Q8K310 846 aaKnown RBP16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Ssrp1Q08943 708 aaKnown RBP16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Nsrp1Q5NCR9 542 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Cers3Q1A3B0 383 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Taok1Q5F2E8 1001 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Basp1Q91XV3 226 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Ces1aE9PYP1 563 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Tdrd9Q14BI7 1383 aa16.01■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Mmel1Q9JLI3 765 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Gm10378F6XQQ1 160 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Tmem67Q8BR76 992 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Ttc21bQ0HA38 1315 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Camsap2Q8C1B1 1461 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Taf4bG5E8Z2 855 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Fam177a1Q8BR63 207 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Prpf31Q8CCF0 499 aaKnown RBP16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Frat2Q8K025 231 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Iqgap2Q3UQ44 1575 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Gm21698A0A087WQP8 267 aa16■□□□□ 0.15
Col7a1-202ENSMUST00000112070 HnrnpcQ9Z204 313 aaKnown RBP15.99■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Exoc1Q8R3S6 894 aa15.99■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Efcc1Q9JJF6 558 aa15.99■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Eftud2O08810 971 aaKnown RBP15.99■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Cct6bQ61390 531 aa15.99■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Q8R1Y2 203 aa15.99■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Zmym4A2A791 1549 aaKnown RBP15.99■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Luc7l3Q5SUF2 432 aaKnown RBP15.99■□□□□ 0.15
Col7a1-202ENSMUST00000112070 Egfem1Q8C088 590 aa15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms