RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Gse1Q3U3C9 1213 aa7.71□□□□□ -1.17
Scn8a-205ENSMUST00000108910 Trim27Q62158 513 aa7.71□□□□□ -1.17
Scn8a-205ENSMUST00000108910 Gm21985Q6P6P5 1106 aa7.71□□□□□ -1.17
Scn8a-205ENSMUST00000108910 Pdcl2Q78Y63 240 aa7.71□□□□□ -1.17
Scn8a-205ENSMUST00000108910 4921504E06RikQ8CET2 560 aa7.71□□□□□ -1.17
Scn8a-205ENSMUST00000108910 Cyb5rlB1AS42 316 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Dnm1P39053 867 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Nucb2P81117 420 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 U2af1l4Q8BGJ9 220 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ift74Q8BKE9 600 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Plekho1Q9JIY0 408 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Fam107bQ3TGF2 131 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Farp2Q91VS8 1065 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 DroshaQ5HZJ0 1373 aaKnown RBP7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 CntrlA2AL36 2334 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Atp2b1G5E829 1220 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Hdhd2Q3UGR5 259 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 WtapQ9ER69 396 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Fam83gQ5SWY7 812 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tmem266Q8BZB3 538 aa7.71□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Nkx1-2P42580 305 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Rad50P70388 1312 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ankrd40Q5SUE8 363 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Prpf40aQ9R1C7 953 aaKnown RBP7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Usp5P56399 858 aaKnown RBP7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ano10Q8BH79 659 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ssrp1Q08943 708 aaKnown RBP7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Snx13Q6PHS6 957 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Fermt2Q8CIB5 680 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Mapkbp1Q6NS57 1503 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Nf2P46662 596 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Nip7Q9CXK8 180 aaKnown RBP7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 2310002L09RikQ9D7L5 217 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 FanclQ9CR14 375 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Atp10dQ8K2X1 1416 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Naip7Q9JIB3 1402 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Naip6Q9JIB6 1403 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Rbm8a2A0A0N4SUH6 174 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Smarcc1P97496 1104 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Dact3Q0PHV7 610 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 DlatQ8BMF4 642 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Rbm8aQ9CWZ3 174 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Zbtb43Q9DAI4 467 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Pkd2l2Q9JLG4 621 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Uchl5Q9WUP7 329 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tbc1d8bA3KGB4 1114 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Syt10Q9R0N4 523 aa7.7□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ankrd26Q811D2 1581 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 GmnnO88513 206 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Spata24Q6P926 205 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Fam160b2Q80YR2 744 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Cyp4f39Q8BGU0 532 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Dzip1Q8BMD2 852 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Fam177a1Q8BR63 207 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tmx1Q8VBT0 278 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Slc1a4O35874 532 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Frat2Q8K025 231 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Brd3Q8K2F0 726 aaKnown RBP7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Exoc5Q3TPX4 708 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Psmd1Q3TXS7 953 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Sun3Q5SS91 320 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 ClasrpQ8CFC7 668 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ift122Q6NWV3 1182 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Cdca8Q8BHX3 289 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Kiaa1524Q8BWY9 907 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Klhl30Q8C3F7 581 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Krt79Q8VED5 531 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 StambpQ9CQ26 424 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Uspl1Q3ULM6 1089 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Vps37cQ8R105 352 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Slx4ipQ9D7Y9 413 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Rapgef3Q8VCC8 918 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Chd1lQ9CXF7 900 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tmem132eQ6IEE6 982 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 DymQ8CHY3 669 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ctage5Q8R311 779 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Lmbr1lQ9D1E5 489 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ranbp6Q8BIV3 1105 aa7.69□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Atp7aQ64430 1491 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 LifrP42703 1092 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Krt15Q61414 452 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Mrps27Q8BK72 415 aaKnown RBP7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Efcab2Q9CQ46 164 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Slc4a4O88343 1079 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 DesP31001 469 aaKnown RBP7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Znf697Q569E7 569 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Atp8b3Q6UQ17 1335 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 E9QMW4 1145 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Pdia3P27773 505 aaKnown RBP7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ptcd1Q8C2E4 695 aaKnown RBP7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 F2rP30558 430 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Mex3cQ05A36 652 aaKnown RBP7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ncf1Q09014 390 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ift88Q61371 824 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 IqcgQ80W32 419 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Zc3h12cQ5DTV4 884 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Epb41l3Q9WV92 929 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Igflr1Q3U4N7 345 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Slc5a4bQ91ZP4 660 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Pik3ap1Q9EQ32 811 aa7.68□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms