RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Ift57Q8BXG3 429 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Atg4aQ8C9S8 396 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Kdm4cQ8VCD7 1054 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Adck5Q80V03 582 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Uggt2E9Q4X2 1504 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Tarbp1E9Q368 1579 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Tti2Q8BGV4 512 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Gimap5Q8BWF2 308 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Rdm1Q9CQK3 281 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Ak2Q9WTP6 239 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Izumo3A6PWV3 263 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 SympkQ80X82 1284 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 U2af1l4Q8BGJ9 220 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Sugp2Q8CH09 1067 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Pet2A2AHY8 747 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Usp25P57080 1055 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Znf692Q3U381 531 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Prkab2Q6PAM0 271 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Snx13Q6PHS6 957 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Cyp27a1Q9DBG1 533 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 ParvgQ9ERD8 331 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Cfap73J3QPZ5 306 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Nek11Q8C0Q4 628 aa18.43■□□□□ 0.54
Ret-202ENSMUST00000088790 Ppp1r10Q80W00 888 aaKnown RBP18.42■□□□□ 0.54
Ret-202ENSMUST00000088790 Ankrd1Q9CR42 319 aa18.42■□□□□ 0.54
Ret-202ENSMUST00000088790 Ccdc112A0AUP1 442 aa18.42■□□□□ 0.54
Ret-202ENSMUST00000088790 Slc39a6Q8C145 765 aa18.42■□□□□ 0.54
Ret-202ENSMUST00000088790 Rad23bP54728 416 aa18.42■□□□□ 0.54
Ret-202ENSMUST00000088790 Pdcl2Q78Y63 240 aa18.42■□□□□ 0.54
Ret-202ENSMUST00000088790 Ampd3O08739 766 aa18.41■□□□□ 0.54
Ret-202ENSMUST00000088790 Ano1Q8BHY3 960 aa18.41■□□□□ 0.54
Ret-202ENSMUST00000088790 Luc7lQ9CYI4 371 aaKnown RBP18.41■□□□□ 0.54
Ret-202ENSMUST00000088790 Tpx2A2APB8 745 aaKnown RBP18.41■□□□□ 0.54
Ret-202ENSMUST00000088790 ItpripQ3TNL8 555 aa18.41■□□□□ 0.54
Ret-202ENSMUST00000088790 Commd10Q8JZY2 202 aa18.41■□□□□ 0.54
Ret-202ENSMUST00000088790 Znf704Q9ERQ3 566 aa18.41■□□□□ 0.54
Ret-202ENSMUST00000088790 Pprc1Q6NZN1 1644 aa18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 Trim25Q61510 634 aaKnown RBP18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 Lrrfip1Q3UZ39 729 aaKnown RBP18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 Txndc16Q7TN22 820 aa18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 Cdca8Q8BHX3 289 aa18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 CrklP47941 303 aa18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 Esyt1Q3U7R1 1092 aaKnown RBP18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 Cep120Q7TSG1 988 aa18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 Znf335A2A5K6 1337 aa18.4■□□□□ 0.54
Ret-202ENSMUST00000088790 Gm45015A0A140LII9 184 aa18.39■□□□□ 0.54
Ret-202ENSMUST00000088790 Gm18336A0A140LIU8 765 aa18.39■□□□□ 0.54
Ret-202ENSMUST00000088790 Ccdc172Q810N9 267 aa18.39■□□□□ 0.54
Ret-202ENSMUST00000088790 Usp54Q8BL06 1588 aaKnown RBP18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Cnksr1A2A9K7 700 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Cnot6lQ8VEG6 555 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Brms1Q99N20 246 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 NsmfQ99NF2 532 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Chd1lQ9CXF7 900 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Cep89Q9CZX2 791 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Zbtb43Q9DAI4 467 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Dnm1P39053 867 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Pafah1b1P63005 410 aaKnown RBP18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Traf3ip1Q149C2 625 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Rufy3Q9D394 469 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Znf287Q9EQB9 759 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Synj2Q9D2G5 1434 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Tmx3Q8BXZ1 456 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Atg3Q9CPX6 314 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Ttc41Q692V3 1318 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Col17a1Q07563 1470 aa18.39■□□□□ 0.53
Ret-202ENSMUST00000088790 Zscan29E9Q5B4 869 aa18.38■□□□□ 0.53
Ret-202ENSMUST00000088790 Zbtb45Q52KG4 520 aa18.38■□□□□ 0.53
Ret-202ENSMUST00000088790 Zc3h12cQ5DTV4 884 aa18.38■□□□□ 0.53
Ret-202ENSMUST00000088790 Utp18Q5SSI6 552 aaKnown RBP18.38■□□□□ 0.53
Ret-202ENSMUST00000088790 Mlh1Q9JK91 760 aa18.38■□□□□ 0.53
Ret-202ENSMUST00000088790 Tmem143Q8VD26 458 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Abca16E9PWJ7 1678 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Gimap8Q75N62 688 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Larp6Q8BN59 492 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 DymQ8CHY3 669 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Plxnc1Q9QZC2 1574 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Fhod3Q76LL6 1578 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Slc14a2Q8R4T9 930 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Slc5a4bQ91ZP4 660 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Api5O35841 504 aaKnown RBP18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Sdc2P43407 202 aa18.37■□□□□ 0.53
Ret-202ENSMUST00000088790 Spg7Q3ULF4 781 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Spag5Q7TME2 1165 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Baiap2l1Q9DBJ3 514 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Nckap5lQ6GQX2 1323 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Kif21bQ9QXL1 1668 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Stx8O88983 236 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Nucb2P81117 420 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Abcf1Q6P542 837 aaKnown RBP18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Ptcd1Q8C2E4 695 aaKnown RBP18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Lrrfip2Q91WK0 415 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Znf608Q56A10 1511 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Wdhd1P59328 1117 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Rbm19Q8R3C6 952 aaKnown RBP18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 MicalclQ9D5U9 680 aa18.36■□□□□ 0.53
Ret-202ENSMUST00000088790 Scaf1Q5U4C3 1256 aaKnown RBP18.35■□□□□ 0.53
Ret-202ENSMUST00000088790 Dmrt2Q8BG36 561 aa18.35■□□□□ 0.53
Ret-202ENSMUST00000088790 Prl3d3A0A0M6L0J6 224 aa18.35■□□□□ 0.53
Ret-202ENSMUST00000088790 Chl1P70232 1209 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms