RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Nat10Q8K224 1024 aaKnown RBP10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 CrklP47941 303 aa10.15□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Atp2b3Q0VF55 1220 aa10.15□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Fchsd1Q6PFY1 688 aa10.15□□□□□ -0.79
Ttc28-201ENSMUST00000040111 CltaO08585 235 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Mapkapk5O54992 473 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 EspnlQ3UYR4 1005 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Mdm2P23804 489 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Ttc5Q99LG4 440 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Dydc1Q9D9T0 175 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Rbm8a2A0A0N4SUH6 174 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Kif22Q3V300 660 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Cdca8Q8BHX3 289 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Rbm8aQ9CWZ3 174 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Tpd52l2Q9CYZ2 220 aaKnown RBP10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Map3k19E9Q3S4 1311 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Med4Q9CQA5 270 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Cfap65Q3V0B4 1847 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Sbno1Q689Z5 1390 aa10.14□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Wdr63B2RY71 923 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Rcan3Q9JKK0 239 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Hs6st3Q9QYK4 470 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Pdia3P27773 505 aaKnown RBP10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Map3k12Q60700 888 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 4930504O13RikQ8C5Z9 145 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Lrrfip2Q91WK0 415 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Pla2r1Q62028 1487 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Cacna2d4Q5RJF7 1116 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Mical3Q8CJ19 1993 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Tax1bp1Q3UKC1 814 aaKnown RBP10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Vgll3P85442 326 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Spata24Q6P926 205 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Exoc8Q6PGF7 716 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 KdrP35918 1367 aa10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Rbm17Q8JZX4 405 aaKnown RBP10.13□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Txndc16Q7TN22 820 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Lrrcc1Q69ZB0 1026 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Echdc1Q9D9V3 322 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Sun3Q5SS91 320 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Luzp1Q8R4U7 1068 aaKnown RBP10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Mipol1Q9D9F8 279 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Hs1bp3Q3TC93 395 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Tmc2Q8R4P4 888 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Arhgef40Q3UPH7 1517 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Myo1bP46735 1107 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 MycbpapQ5SUV2 932 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Cc2d1bQ8BRN9 848 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Cyp26c1B2RXA7 518 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 HelbQ6NVF4 1074 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Ankle2Q6P1H6 964 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Ppp6r1Q7TSI3 856 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 SympkQ80X82 1284 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Irs4Q9Z0Y7 1216 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Nkx1-2P42580 305 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Yars2Q8BYL4 472 aaKnown RBP10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Sde2Q8K1J5 448 aaKnown RBP10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Nlgn1Q99K10 843 aa10.12□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Sh3d21Q7TSG5 549 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 U2af1l4Q8BGJ9 220 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Sap30bpQ02614 308 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Kiaa1211Q5PR69 1207 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 ThemisQ8BGW0 636 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Tmem143Q8VD26 458 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Dnm1P39053 867 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Als2cr12Q8BVM7 383 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Lrrc45Q8CIM1 670 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 St5Q924W7 1134 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Vamp4O70480 141 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Arhgef1Q61210 920 aaKnown RBP10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Lman1Q9D0F3 517 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Chmp6P0C0A3 200 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Gimap8Q75N62 688 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Cfap58B2RW38 873 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Zkscan8Q8BSL0 588 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 MthfsQ9D110 203 aa10.11□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Kif21aQ9QXL2 1672 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Bin2D3Z6Q9 489 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Metap2O08663 478 aaKnown RBP10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Taf7Q9R1C0 341 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 NcapgE9PWG6 1004 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Esco1Q69Z69 843 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 ImpactO55091 318 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 TxlnaQ6PAM1 554 aaKnown RBP10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Grm8P47743 908 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Ncbp1Q3UYV9 790 aaKnown RBP10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Parp2O88554 559 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Arhgef18Q6P9R4 1021 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Ift74Q8BKE9 600 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Shroom2A2ALU4 1481 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Fam107bQ3TGF2 131 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Pik3r4Q8VD65 1358 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Rapgef6Q5NCJ1 1609 aa10.1□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Hvcn1Q3U2S8 269 aa10.09□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Mum1Q6DID5 682 aa10.09□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Tmem87bQ8BKU8 555 aa10.09□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Tlr7P58681 1050 aa10.09□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Adora1Q60612 326 aa10.09□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Acnat2Q8BGG9 420 aa10.09□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Speer4dL7N216 212 aa10.09□□□□□ -0.79
Ttc28-201ENSMUST00000040111 Calm1P0DP26 149 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 181.5 ms