RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Rab3gap2Q8BMG7 1366 aa13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Pdcd11Q6NS46 1862 aaKnown RBP13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Mcm2P97310 904 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ddr1Q03146 911 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ctnna3Q65CL1 895 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Snx13Q6PHS6 957 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Samm50Q8BGH2 469 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ttc27Q8CD92 847 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Cetn4Q8K4K1 168 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Smc3Q9CW03 1217 aaKnown RBP13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Klc4Q9DBS5 619 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nhsl1Q8CAF4 1587 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 CltcQ68FD5 1675 aaKnown RBP13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Pdzrn4E9PUZ9 1014 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Gbp4Q61107 620 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ube2oQ6ZPJ3 1288 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ppp2r1aQ76MZ3 589 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 St18Q80TY4 1045 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Fam163aQ8CAA5 168 aa13.41□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nat1P50294 290 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ube2hP62257 183 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Mum1l1Q4VA55 681 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nlrp4fQ66X05 959 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Lrrc8aQ80WG5 810 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Mta1Q8K4B0 715 aaKnown RBP13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 RpainQ9CWY9 219 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Snx1Q9WV80 522 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nphp4P59240 1425 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Usp35M0QWN7 1009 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Trove2O08848 538 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nbr1P97432 988 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 B4galnt4Q766D5 1034 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Zscan22Q8BGS5 496 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Hps6Q8BLY7 805 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Sgsm3Q8VCZ6 750 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Prc1Q99K43 603 aaKnown RBP13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 Tlr9Q9EQU3 1032 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 PdcQ9QW08 244 aa13.4□□□□□ -0.26
Trim55-201ENSMUST00000029139 NpcdF8VQB8 469 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Cpsf2O35218 782 aaKnown RBP13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Mcm3P25206 812 aaKnown RBP13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Kcnd1Q03719 651 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ppip5k2Q6ZQB6 1129 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ankrd24Q80VM7 985 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Znf445Q8R2V3 986 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ccar2Q8VDP4 922 aaKnown RBP13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Spata1Q9D5R4 444 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Stk3Q9JI10 497 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Fut8Q9WTS2 575 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Uri1Q3TLD5 531 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Chpf2Q3UU43 768 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Gas2l2Q5SSG4 860 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 LarsQ8BMJ2 1178 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 PreplQ8C167 725 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Snw1Q9CSN1 536 aaKnown RBP13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 ChmQ9QXG2 665 aa13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Spag9Q58A65 1321 aaKnown RBP13.39□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ccdc146E9Q9F7 977 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Zscan10Q3URR7 782 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Lmtk3Q5XJV6 1424 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ppp4r3aQ6P2K6 820 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Q8CEZ4 452 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Smc1bQ920F6 1248 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Trap1Q9CQN1 706 aaKnown RBP13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Tubb4aQ9D6F9 444 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 PrxO55103 1391 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ccdc57Q6PHN1 1016 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Gpt2Q8BGT5 522 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ccdc80Q8R2G6 949 aa13.38□□□□□ -0.27
Trim55-201ENSMUST00000029139 IbtkQ6ZPR6 1352 aaKnown RBP13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Dnajc21E9Q8D0 531 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Rb1P13405 921 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 L1td1Q587J6 782 aaKnown RBP13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Klra6Q60653 266 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 NexnQ7TPW1 607 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Nek5Q7TSC3 627 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Srgap3Q812A2 1099 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Exd1Q8CDF7 570 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Sem1P60897 70 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Sap30bpQ02614 308 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Gtf2f1Q3THK3 508 aaKnown RBP13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Cypt2Q6P924 180 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Tbx22Q8K402 517 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Fam76aQ922G2 307 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Bcl11bQ99PV8 884 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 4933428M09RikQ9D3X3 192 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Clip2Q9Z0H8 1047 aa13.37□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ccdc121E9Q6D3 323 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Cfap100Q80VN0 613 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Cnksr2Q80YA9 1032 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Jakmip1Q8BVL9 626 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 MyripQ8K3I4 856 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Gle1Q8R322 699 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Inpp5dQ9ES52 1191 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Abcc3B2RX12 1523 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 C2cd2E9Q3C1 696 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Ripply1Q2WG77 201 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Znf513Q6PD29 541 aa13.36□□□□□ -0.27
Trim55-201ENSMUST00000029139 Atp6v1dP57746 247 aa13.35□□□□□ -0.27
Trim55-201ENSMUST00000029139 Pfkfb2P70265 519 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms