RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 LGI4Q8N135 537 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 FAM160A2Q8N612 972 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 NLGN4YQ8NFZ3 816 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 OR9Q2Q8NGE9 314 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 SUN3Q8TAQ9 357 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 PIP5K1AQ99755 562 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 TRIM45Q9H8W5 580 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 PCDHGA2Q9Y5H1 932 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 TRIOBPQ9H2D6 2365 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 PRAMEF27A3QJZ7 478 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 MYL12BO14950 172 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC35G6P0C7Q6 338 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 NAT2P11245 290 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 MYL12AP19105 171 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 RIN1Q13671 783 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 GALEQ14376 348 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 LASP1Q14847 261 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 LCN1P1Q5VSP4 162 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC48A1Q6P1K1 146 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 TEX261Q6UWH6 196 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 PRSS42Q7Z5A4 293 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 ABI3BPQ7Z7G0 1075 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 CDH24Q86UP0 819 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 OR4C15Q8NGM1 316 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 LILRB1Q8NHL6 650 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 NIPSNAP1Q9BPW8 284 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 TREX2Q9BQ50 279 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 PPA2Q9H2U2 334 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 AMBNQ9NP70 447 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 ACTR10Q9NZ32 417 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 ENPP4Q9Y6X5 453 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 U3KQ87 197 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 FANCMQ8IYD8 2048 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 P2RX6O15547 441 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 MBTPS2O43462 519 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 LGI1O95970 557 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 CSF2P04141 144 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 NR2F1P10589 423 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 PVRP15151 417 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 GABRB1P18505 474 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 C1orf61Q13536 156 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 MICAQ29983 383 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 DEFB134Q4QY38 66 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 KIAA0895LQ68EN5 471 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 GPR32P1Q8NGA4 272 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 VANGL1Q8TAA9 524 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 CNPPD1Q9BV87 410 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 TPSD1Q9BZJ3 242 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 RACGAP1Q9H0H5 632 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 ACER3Q9NUN7 267 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 UCKL1Q9NWZ5 548 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 CNOT2Q9NZN8 540 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 CPNE7Q9UBL6 633 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 P2RX2Q9UBL9 471 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 ATPIF1Q9UII2 106 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 CES1P1Q9UKY3 287 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 VCANP13611 3396 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 NME6O75414 186 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 GADD45GO95257 159 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 IFNA16P05015 189 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 HMGN2P05204 90 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 THEGLP0DJG4 465 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 ICAM2P13598 275 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 MAP2K3P46734 347 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 DGKEP52429 567 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 LIM2P55344 173 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 HOXC5Q00444 222 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 TGM3Q08188 693 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 SSX1Q16384 188 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 GARNL3Q5VVW2 1013 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 MZT2BQ6NZ67 158 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 TAF8Q7Z7C8 310 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 ZNF680Q8NEM1 530 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 OR9A2Q8NGT5 310 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 TRMT61AQ96FX7 289 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 EQTNQ9NQ60 294 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 SEMA3GQ9NS98 782 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 SEC14L3Q9UDX4 400 aa15.96■□□□□ 0.15
SHKBP1-205ENST00000594973 CCDC88CQ9P219 2028 aa15.96■□□□□ 0.14
SHKBP1-205ENST00000594973 FABP12A6NFH5 140 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 TOR1AO14656 332 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 HCN1O60741 890 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 HLA-DQB1P01920 261 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 CSNK2A2P19784 350 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 FCRL6Q6DN72 434 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 FRMPD2BQ6IN97 320 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 FIGLAQ6QHK4 219 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 RBM45Q8IUH3 476 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 GPBAR1Q8TDU6 330 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 UTP15Q8TED0 518 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 GTPBP3Q969Y2 492 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 GAL3ST3Q96A11 431 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 C16orf58Q96GQ5 468 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 OR2A5Q96R48 311 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 ZNF607Q96SK3 696 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 WFDC6Q9BQY6 131 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 RBFOX1Q9NWB1 397 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 SEC14L4Q9UDX3 406 aa15.95■□□□□ 0.14
SHKBP1-205ENST00000594973 NINQ8N4C6 2090 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms