RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ZNF318Q5VUA4 2279 aa9.66□□□□□ -0.86
VPS25-203ENST00000589520 A0A1B0GVT2 93 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 INMTO95050 263 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 ATE1O95260 518 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 ZIC2O95409 532 aaPredicted RBP9.65□□□□□ -0.86
VPS25-203ENST00000589520 CT62P0C5K7 136 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 TNNI3P19429 210 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 PCSK6P29122 969 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 SLC15A1P46059 708 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 OMPP47874 163 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 PCYT1AP49585 367 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 EMDP50402 254 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 GP2P55259 537 aaKnown RBP9.65□□□□□ -0.86
VPS25-203ENST00000589520 GFERP55789 205 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 OR1D5P58170 312 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 DCAF7P61962 342 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 RHAGQ02094 409 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 PIGFQ07326 219 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 NFATC3Q12968 1075 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 IRF3Q14653 427 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 GINS1Q14691 196 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 ZNF141Q15928 474 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 SMN1Q16637 294 aaKnown RBP9.65□□□□□ -0.86
VPS25-203ENST00000589520 MFSD4BQ5TF39 518 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 LAIR1Q6GTX8 287 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 SLC27A4Q6P1M0 643 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 Q6ZPB1 254 aaPredicted RBP9.65□□□□□ -0.86
VPS25-203ENST00000589520 ZNF367Q7RTV3 350 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 PRICKLE2Q7Z3G6 844 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 GDF7Q7Z4P5 450 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 COMTD1Q86VU5 262 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 CCDC103Q8IW40 242 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 SLITRK4Q8IW52 837 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 ZNF440Q8IYI8 595 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 UBE2FQ969M7 185 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 YIPF6Q96EC8 236 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 TMEM80Q96HE8 168 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 ART5Q96L15 291 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 VSTM2LQ96N03 204 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 NDC1Q9BTX1 674 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 SPRTNQ9H040 489 aaPredicted RBP9.65□□□□□ -0.86
VPS25-203ENST00000589520 QRSL1Q9H0R6 528 aaKnown RBP9.65□□□□□ -0.86
VPS25-203ENST00000589520 ANKRA2Q9H9E1 313 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 MRPS18AQ9NVS2 196 aaKnown RBP9.65□□□□□ -0.86
VPS25-203ENST00000589520 UCKL1Q9NWZ5 548 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 IL20Q9NYY1 176 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 HCN3Q9P1Z3 774 aa9.65□□□□□ -0.86
VPS25-203ENST00000589520 SNRNP200O75643 2136 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 CPSF4LA6NMK7 179 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 DSCR3O14972 297 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 TPST2O60704 377 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 SDC3O75056 442 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 BCAS1O75363 584 aaPredicted RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 FADS2O95864 444 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 TP53P04637 393 aaPredicted RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 DCNP07585 359 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 ENDOUP21128 410 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 PSMB9P28065 219 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 CSTF2P33240 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS25-203ENST00000589520 HOXD12P35452 270 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 RBM34P42696 430 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 GCGRP47871 477 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 SERPINB10P48595 397 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 MASP1P48740 699 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 ZNF136P52737 540 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 ATP12AP54707 1039 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 TUBA1BP68363 451 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 EFNB1P98172 346 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 PSG6Q00889 435 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 ACY1Q03154 408 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 ST3GAL4Q11206 333 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 DSG2Q14126 1118 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 ZNF267Q14586 743 aaPredicted RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 EXOSC7Q15024 291 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 NR0B2Q15466 257 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 OR1Q1Q15612 314 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 MOGQ16653 247 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS25-203ENST00000589520 TIMM50Q3ZCQ8 353 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 FLYWCH1Q4VC44 716 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 PMS2CLQ68D20 193 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 PLAG1Q6DJT9 500 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 TMEM71Q6P5X7 295 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 TUBA1AQ71U36 451 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 OLIG3Q7RTU3 272 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 FAM181AQ8N9Y4 354 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 B3GNT7Q8NFL0 401 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 WDR36Q8NI36 951 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 PIK3R3Q92569 461 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 SGCDQ92629 289 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 SLC46A1Q96NT5 459 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 OR10A5Q9H207 317 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 ZNF768Q9H5H4 540 aaKnown RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 PLGRKTQ9HBL7 147 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 PRMT8Q9NR22 394 aaPredicted RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 TVP23BQ9NYZ1 205 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 SRPK3Q9UPE1 567 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 ERGIC3Q9Y282 383 aa9.64□□□□□ -0.87
VPS25-203ENST00000589520 GPR55Q9Y2T6 319 aaPredicted RBP9.64□□□□□ -0.87
VPS25-203ENST00000589520 A0A1B0GTQ1 180 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms