RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 AK4P27144 223 aaPredicted RBP9.9□□□□□ -0.83
USB1-212ENST00000566082 PKLRP30613 574 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 SIM1P81133 766 aaPredicted RBP9.9□□□□□ -0.83
USB1-212ENST00000566082 PGGHGQ32M88 737 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 DEFB134Q4QY38 66 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 SIGIRRQ6IA17 410 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 FAM71E1Q6IPT2 247 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 TMPRSS12Q86WS5 348 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 SPERTQ8NA61 448 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 OR9A2Q8NGT5 310 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 ACOT11Q8WXI4 607 aaPredicted RBP9.9□□□□□ -0.83
USB1-212ENST00000566082 KIAA1143Q96AT1 154 aaPredicted RBP9.9□□□□□ -0.83
USB1-212ENST00000566082 TBC1D20Q96BZ9 403 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 RBM18Q96H35 190 aaKnown RBP9.9□□□□□ -0.83
USB1-212ENST00000566082 RAD9AQ99638 391 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 ABCG4Q9H172 646 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 SLC25A18Q9H1K4 315 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 ZNF334Q9HCZ1 680 aaPredicted RBP9.9□□□□□ -0.83
USB1-212ENST00000566082 USP36Q9P275 1121 aaKnown RBP9.9□□□□□ -0.83
USB1-212ENST00000566082 NRXN2Q9P2S2 1712 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 TRDV1A0A1B0GX56 115 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 KANTRA0A1W2PQU2 76 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 OR2AT4A6NND4 320 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 H3BNC9 293 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 RBBP9O75884 186 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TCRBP04435 133 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 INHAP05111 366 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 DRD2P14416 443 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 SDHBP21912 280 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 SLC6A6P31641 620 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 LIM2P55344 173 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 MGAT3Q09327 533 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 ELP2Q6IA86 826 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 CD300LGQ6UXG3 332 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 LIPIQ6XZB0 460 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 SAMD14Q8IZD0 417 aaPredicted RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 MOSPD2Q8NHP6 518 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 NR4A3Q92570 626 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 NEURL3Q96EH8 262 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 DNAJA3Q96EY1 480 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 CASD1Q96PB1 797 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 OR2M2Q96R28 347 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 ZNF471Q9BX82 626 aaPredicted RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 SRMSQ9H3Y6 488 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 CDCP1Q9H5V8 836 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 CKLFQ9UBR5 152 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 FBXL3Q9UKT7 428 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 DOCK1Q14185 1865 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 GRXCR1A8MXD5 290 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 FOXE1O00358 373 aaPredicted RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 YY2O15391 372 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 NARSO43776 548 aaKnown RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 SPDEFO95238 335 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 AGR2O95994 175 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 F11P03951 625 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TRIM23P36406 574 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 PRLHRP49683 370 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 ARFIP1P53367 373 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 POU6F2P78424 691 aaPredicted RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 B4GALNT1Q00973 533 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 GALK2Q01415 458 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TSPAN31Q12999 210 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 OCLNQ16625 522 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 PRAMEF17Q5VTA0 474 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 ALKAL2Q6UX46 152 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 C3P1Q6ZMU1 363 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 OR56A3Q8NH54 315 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 RNF31Q96EP0 1072 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 PDXPQ96GD0 296 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 KXD1Q9BQD3 176 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 OR52D1Q9H346 318 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 B3GNT2Q9NY97 397 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TAAR2Q9P1P5 351 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TRAPPC4Q9Y296 219 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 NOP16Q9Y3C1 178 aaKnown RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 NPIPA5A0A0B4J1W7 369 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 C1orf226A1L170 272 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 OR6C74A6NCV1 312 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 SLC9B1P1A6NJY1 282 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 NPIPA7E9PJI5 369 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 H7C2Y5 167 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 PPP1R3DO95685 299 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 PROS1P07225 676 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 NPIPA8P0DM63 369 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TIMP2P16035 220 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 HMGA1P17096 107 aaKnown RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 VAMP1P23763 118 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 PGDP52209 483 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 SKP1P63208 163 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TEKQ02763 1124 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 CRYZQ08257 329 aaKnown RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 IRF5Q13568 498 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TRAM1Q15629 374 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 ENTPD8Q5MY95 495 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 C6orf132Q5T0Z8 1188 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 CCNJQ5T5M9 372 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 C17orf99Q6UX52 265 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 VITQ6UXI7 678 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 GPR135Q8IZ08 494 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 FAM26EQ8N5C1 309 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms