RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 RFX3P48380 749 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 UGT2B15P54855 530 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 RGS8P57771 180 aaPredicted RBP8.74□□□□□ -1.01
LINC00838-201ENST00000562956 ENTPD8Q5MY95 495 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 PRSS42Q7Z5A4 293 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 MEX3DQ86XN8 651 aaKnown RBP8.74□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF540Q8NDQ6 660 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 EDAQ92838 391 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 RNF31Q96EP0 1072 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 CNPPD1Q9BV87 410 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 DGCR6LQ9BY27 220 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 LHPPQ9H008 270 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 TRIM45Q9H8W5 580 aaPredicted RBP8.74□□□□□ -1.01
LINC00838-201ENST00000562956 ENAMQ9NRM1 1142 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 LANCL2Q9NS86 450 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 TPRKBQ9Y3C4 175 aa8.74□□□□□ -1.01
LINC00838-201ENST00000562956 SPTBP11277 2137 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 A0A087WUU8 490 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 CPED1A4D0V7 1026 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 SIGLEC6O43699 453 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 FAM20BO75063 409 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 BCAS1O75363 584 aaPredicted RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 CYP7B1O75881 506 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 IGKV1D-16P01601 117 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 TP53P04637 393 aaPredicted RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 IFNA16P05015 189 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 CFIP05156 583 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 THBS1P07996 1170 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 GCGRP47871 477 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 BMXP51813 675 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 GTF2IRD2BQ6EKJ0 949 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF574Q6ZN55 896 aaPredicted RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 GTF2IRD2Q86UP8 949 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 SLC15A4Q8N697 577 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 OR13F1Q8NGS4 319 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 OR2I1PQ8NGU4 316 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 OR4C6Q8NH72 309 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 HPS1Q92902 700 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 VSTM2LQ96N03 204 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 MCHR1Q99705 422 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 LMF2Q9BU23 707 aaKnown RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 DUSP23Q9BVJ7 150 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 POLR2J3Q9H1A7 115 aaKnown RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 CACYBPQ9HB71 228 aaKnown RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 SCN3BQ9NY72 215 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 SUSD2Q9UGT4 822 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 ENOPH1Q9UHY7 261 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 ERVK-19Q9WJR5 959 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 CCDC88CQ9P219 2028 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 AGRPO00253 132 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 AK1P00568 194 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 DBIP07108 87 aaKnown RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 PRG2P13727 222 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 NID1P14543 1247 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 CNR2P34972 360 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF136P52737 540 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 EMX1Q04741 257 aaPredicted RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 MRPL2Q5T653 305 aaKnown RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 THOC7Q6I9Y2 204 aaKnown RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 NPSR1Q6W5P4 371 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 BORCS5Q969J3 196 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 TUBA1CQ9BQE3 449 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF768Q9H5H4 540 aaKnown RBP8.73□□□□□ -1.01
LINC00838-201ENST00000562956 SIAEQ9HAT2 523 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 AMBNQ9NP70 447 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 C11orf16Q9NQ32 467 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 IMPAD1Q9NX62 359 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 PCDHGA10Q9Y5H3 936 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 SNX5Q9Y5X3 404 aa8.73□□□□□ -1.01
LINC00838-201ENST00000562956 TP53BP1Q12888 1972 aaPredicted RBP8.72□□□□□ -1.01
LINC00838-201ENST00000562956 PATE3B3GLJ2 98 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 H3BN98 237 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 AP3D1O14617 1153 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 SEC14L2O76054 403 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 CLPSP04118 112 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 GKN3PP0CG01 181 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 MAP2K4P45985 399 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 PLAURQ03405 335 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 FUT7Q11130 342 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 ILKQ13418 452 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 NR0B2Q15466 257 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 NNATQ16517 81 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 C1orf94Q6P1W5 598 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 PLEKHM3Q6ZWE6 761 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 BTLAQ7Z6A9 289 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 P3H2Q8IVL5 708 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 NKAIN4Q8IVV8 208 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 GPR135Q8IZ08 494 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 DEPDC4Q8N2C3 294 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 C16orf52Q8NHV5 167 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 TBC1D15Q8TC07 691 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF501Q96CX3 271 aaPredicted RBP8.72□□□□□ -1.01
LINC00838-201ENST00000562956 ARSGQ96EG1 525 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 CNDP2Q96KP4 475 aaKnown RBP8.72□□□□□ -1.01
LINC00838-201ENST00000562956 PTCHD1Q96NR3 888 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 NDC1Q9BTX1 674 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 GAREM1Q9H706 876 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 FGF21Q9NSA1 209 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 H3BMQ9 156 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 INMTO95050 263 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms