RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 NPHS1O60500 1241 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 KCNH1O95259 989 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 LINC00032P0C843 101 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 PRPS2P11908 318 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 PEPDP12955 493 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 DDX5P17844 614 aaKnown RBP14.65□□□□□ -0.06
DDX55-212ENST00000544738 ASMTP46597 345 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 AGFG1P52594 562 aaKnown RBP14.65□□□□□ -0.06
DDX55-212ENST00000544738 SORDQ00796 357 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 IFFO1Q0D2I5 559 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 HSPB3Q12988 150 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 KANK2Q63ZY3 851 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 ZNF551Q7Z340 670 aaPredicted RBP14.65□□□□□ -0.06
DDX55-212ENST00000544738 TRABD2AQ86V40 505 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 LRRC75A-AS1Q8N1F1 130 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 FADS6Q8N9I5 356 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 OR2W6PQ8NHA6 318 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 GFM2Q969S9 779 aaKnown RBP14.65□□□□□ -0.06
DDX55-212ENST00000544738 MTERF3Q96E29 417 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 ROPN1BQ9BZX4 212 aaPredicted RBP14.65□□□□□ -0.06
DDX55-212ENST00000544738 DSN1Q9H410 356 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 ANKZF1Q9H8Y5 726 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 ROPN1Q9HAT0 212 aaPredicted RBP14.65□□□□□ -0.06
DDX55-212ENST00000544738 ACSS1Q9NUB1 689 aaPredicted RBP14.65□□□□□ -0.06
DDX55-212ENST00000544738 PTGDR2Q9Y5Y4 395 aa14.65□□□□□ -0.06
DDX55-212ENST00000544738 LSM1O15116 133 aaKnown RBP14.64□□□□□ -0.07
DDX55-212ENST00000544738 SDC1P18827 310 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 HK1P19367 917 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 ALDH3A1P30838 453 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 GABRA3P34903 492 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 MANFP55145 182 aaKnown RBP14.64□□□□□ -0.07
DDX55-212ENST00000544738 CLDN18P56856 261 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 EEFSECP57772 596 aaKnown RBP14.64□□□□□ -0.07
DDX55-212ENST00000544738 C17orf67Q0P5P2 114 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 PDE7AQ13946 482 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 RFTN2Q52LD8 501 aaPredicted RBP14.64□□□□□ -0.07
DDX55-212ENST00000544738 PRSS57Q6UWY2 283 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 LRIG3Q6UXM1 1119 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 R3HCC1LQ7Z5L2 792 aaKnown RBP14.64□□□□□ -0.07
DDX55-212ENST00000544738 GRAMD2AQ8IUY3 354 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 DDIASQ8IXT1 998 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 CDRT4Q8N9R6 151 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 OR2M3Q8NG83 312 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 OR2T11Q8NH01 316 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 PIGTQ969N2 578 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 INTS12Q96CB8 462 aaKnown RBP14.64□□□□□ -0.07
DDX55-212ENST00000544738 PERPQ96FX8 193 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 TSSK3Q96PN8 268 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 FAM111AQ96PZ2 611 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 G6PC3Q9BUM1 346 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 TBL1XR1Q9BZK7 514 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 PIGMQ9H3S5 423 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 TUBB1Q9H4B7 451 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 SH3BP4Q9P0V3 963 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 CLCF1Q9UBD9 225 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 LGALS13Q9UHV8 139 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 TRAF6Q9Y4K3 522 aa14.64□□□□□ -0.07
DDX55-212ENST00000544738 DOCK7Q96N67 2140 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 MED12Q93074 2177 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 TMEM114B3SHH9 223 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 AKAP10O43572 662 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 HCRTR2O43614 444 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 GOSR1O95249 250 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 CRHP06850 196 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 MAPK1P28482 360 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 SERPINB5P36952 375 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 FRKP42685 505 aaPredicted RBP14.63□□□□□ -0.07
DDX55-212ENST00000544738 RFX3P48380 749 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 DIO3P55073 304 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 B3GALT5-AS1P59052 145 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 RPL38P63173 70 aaKnown RBP14.63□□□□□ -0.07
DDX55-212ENST00000544738 GALNTL6Q49A17 601 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 GLYR1Q49A26 553 aaPredicted RBP14.63□□□□□ -0.07
DDX55-212ENST00000544738 ARL13AQ5H913 290 aaPredicted RBP14.63□□□□□ -0.07
DDX55-212ENST00000544738 OR2A2Q6IF42 318 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 MEIOBQ8N635 442 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 GPR151Q8TDV0 419 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 DUSP19Q8WTR2 217 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 TWIST2Q8WVJ9 160 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 HOXB13Q92826 284 aaPredicted RBP14.63□□□□□ -0.07
DDX55-212ENST00000544738 EQTNQ9NQ60 294 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 MED11Q9P086 117 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 NTMQ9P121 344 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 BAIAP2L1Q9UHR4 511 aa14.63□□□□□ -0.07
DDX55-212ENST00000544738 KIAA1549Q9HCM3 1950 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 B4DXG7 233 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 CASKO14936 926 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 NKX2-2O95096 273 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 UTS2O95399 124 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 CHRNGP07510 517 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 TCEA1P23193 301 aaKnown RBP14.62□□□□□ -0.07
DDX55-212ENST00000544738 RPL3P39023 403 aaKnown RBP14.62□□□□□ -0.07
DDX55-212ENST00000544738 MAP3K8P41279 467 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 CPA2P48052 419 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 PRKAG1P54619 331 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 VSNL1P62760 191 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 PRR5P85299 388 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 FOXF2Q12947 444 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 STX5Q13190 355 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 UGT3A2Q3SY77 523 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms