RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 ZNF267Q14586 743 aaPredicted RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 RGNQ15493 299 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 EXOSC6Q5RKV6 272 aaKnown RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 SZRD1Q7Z422 152 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 NET1Q7Z628 596 aaPredicted RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 CALHM3Q86XJ0 350 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 DMRTC2Q8IXT2 367 aaPredicted RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 RPRMLQ8N4K4 120 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 POGLUT1Q8NBL1 392 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 LILRB4Q8NHJ6 448 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 PNPT1Q8TCS8 783 aaKnown RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 SLC2A12Q8TD20 617 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 HOXB13Q92826 284 aaPredicted RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 MCUR1Q96AQ8 359 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 ZNF559Q9BR84 538 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 THTPAQ9BU02 230 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 THUMPD3Q9BV44 507 aaKnown RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 CNPPD1Q9BV87 410 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 SPATA9Q9BWV2 254 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 SERHL2Q9H4I8 314 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 ANKRA2Q9H9E1 313 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 ADA2Q9NZK5 511 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 CD300AQ9UGN4 299 aa19.25■□□□□ 0.67
PKP3-205ENST00000527442 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 MAP1AP78559 2803 aaPredicted RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 ANKHD1Q8IWZ3 2542 aaKnown RBP19.25■□□□□ 0.67
PKP3-205ENST00000527442 ZNF469Q96JG9 3925 aaPredicted RBP19.24■□□□□ 0.67
PKP3-205ENST00000527442 A8MUA0 341 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 FAM220BPB1ANY3 271 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 HRKO00198 91 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 CDK2AP1O14519 115 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 HS6ST1O60243 411 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 CDC40O60508 579 aaKnown RBP eCLIP19.24■□□□□ 0.67
PKP3-205ENST00000527442 HMGN2P05204 90 aaKnown RBP19.24■□□□□ 0.67
PKP3-205ENST00000527442 HSD17B1P14061 328 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 CHRNB4P30926 498 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 PGM1P36871 562 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 GZMMP51124 257 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 CEACAM7Q14002 265 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 EXOSC7Q15024 291 aaKnown RBP19.24■□□□□ 0.67
PKP3-205ENST00000527442 CMPK2Q5EBM0 449 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 MFSD12Q6NUT3 480 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 PGM2L1Q6PCE3 622 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 ZCCHC12Q6PEW1 402 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 ANGPTL8Q6UXH0 198 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 SERPINA11Q86U17 422 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 RNF130Q86XS8 419 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 CCDC71Q8IV32 467 aaPredicted RBP19.24■□□□□ 0.67
PKP3-205ENST00000527442 C10orf111Q8N326 155 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 ZNF615Q8N8J6 731 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 SIMC1Q8NDZ2 872 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 OR52R1Q8NGF1 315 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 ZNF721Q8TF20 911 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 SENP5Q96HI0 755 aaPredicted RBP19.24■□□□□ 0.67
PKP3-205ENST00000527442 ALG2Q9H553 416 aa19.24■□□□□ 0.67
PKP3-205ENST00000527442 KLF13Q9Y2Y9 288 aaPredicted RBP19.24■□□□□ 0.67
PKP3-205ENST00000527442 ZNF407Q9C0G0 2248 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 PRORSD1PA6NEY8 169 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 SSTR4P31391 388 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 TRHRP34981 398 aaPredicted RBP19.23■□□□□ 0.67
PKP3-205ENST00000527442 PRIM2P49643 509 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 GSK3BP49841 420 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 KHKP50053 298 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 HLCSP50747 726 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 ANXA11P50995 505 aaKnown RBP19.23■□□□□ 0.67
PKP3-205ENST00000527442 IST1P53990 364 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 LIPEQ05469 1076 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 LASP1Q14847 261 aaKnown RBP19.23■□□□□ 0.67
PKP3-205ENST00000527442 COX20Q5RI15 118 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.23■□□□□ 0.67
PKP3-205ENST00000527442 TMEM211Q6ICI0 200 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 SULF2Q8IWU5 870 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 ULK2Q8IYT8 1036 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 NFAM1Q8NET5 270 aaPredicted RBP19.23■□□□□ 0.67
PKP3-205ENST00000527442 B3GNT7Q8NFL0 401 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 DOK4Q8TEW6 326 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 ECSITQ9BQ95 431 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 ACTRT3Q9BYD9 372 aa19.23■□□□□ 0.67
PKP3-205ENST00000527442 PRRC2AP48634 2157 aaKnown RBP19.23■□□□□ 0.67
PKP3-205ENST00000527442 ACANP16112 2415 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 CFAP73A6NFT4 308 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 TNFRSF21O75509 655 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 MAP3K8P41279 467 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 MAN2A2P49641 1150 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 EMDP50402 254 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 GPR143P51810 404 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 NR0B1P51843 470 aaKnown RBP19.22■□□□□ 0.67
PKP3-205ENST00000527442 PRKAG1P54619 331 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 SLC37A1P57057 533 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 RPS26P62854 115 aaKnown RBP19.22■□□□□ 0.67
PKP3-205ENST00000527442 FXNQ16595 210 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 EMC4Q5J8M3 183 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 CDC73Q6P1J9 531 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 CDRT4Q8N9R6 151 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 OR10A6Q8NH74 314 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 RND1Q92730 232 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 UTP4Q969X6 686 aaKnown RBP19.22■□□□□ 0.67
PKP3-205ENST00000527442 REXO5Q96IC2 774 aaKnown RBP19.22■□□□□ 0.67
PKP3-205ENST00000527442 CLPTM1LQ96KA5 538 aa19.22■□□□□ 0.67
PKP3-205ENST00000527442 ZNF583Q96ND8 569 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms