RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	AMBN	Q9NP70	447 aa		10.03	□□□□□ -0.8
SPIDR-222	ENST00000524006	C2orf42	Q9NWW7	574 aa		10.03	□□□□□ -0.8
SPIDR-222	ENST00000524006	TVP23B	Q9NYZ1	205 aa		10.03	□□□□□ -0.8
SPIDR-222	ENST00000524006	NLGN3	Q9NZ94	848 aa		10.03	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR10H1	Q9Y4A9	318 aa		10.03	□□□□□ -0.8
SPIDR-222	ENST00000524006	ABCA7	Q8IZY2	2146 aa		10.03	□□□□□ -0.8
SPIDR-222	ENST00000524006	CFAP47	Q6ZTR5	3102 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	AGAP5	A6NIR3	686 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006		E9PQ18	207 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	BCAT2	O15382	392 aa	Predicted RBP	10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	ZNF749	O43361	778 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	BCAS1	O75363	584 aa	Predicted RBP	10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	RAB36	O95755	333 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	ADORA3	P0DMS8	318 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	CDK4	P11802	303 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	NID1	P14543	1247 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	GNS	P15586	552 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	NR4A1	P22736	598 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	CSTF2	P33240	577 aa	Known RBP eCLIP	10.02	□□□□□ -0.81	1e-11	■■■■□ 21.8
SPIDR-222	ENST00000524006	CXCL12	P48061	93 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	ARRB1	P49407	418 aa	Predicted RBP	10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	PGD	P52209	483 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	LSM3	P62310	102 aa	Known RBP	10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	BNIP3	Q12983	259 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	FAM53B	Q14153	422 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	GAS6	Q14393	721 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	KLHL22	Q53GT1	634 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	MRPL2	Q5T653	305 aa	Known RBP	10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	FHL5	Q5TD97	284 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	PLAG1	Q6DJT9	500 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	LAIR1	Q6GTX8	287 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	C1orf94	Q6P1W5	598 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	FIGNL1	Q6PIW4	674 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	PLXDC1	Q8IUK5	500 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	GPR135	Q8IZ08	494 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	NLGN4X	Q8N0W4	816 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	CARF	Q8N187	725 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	METTL27	Q8N6F8	245 aa	Predicted RBP	10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	IQCF1	Q8N6M8	205 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	C7orf57	Q8NEG2	295 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	FANK1	Q8TC84	345 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	DOK4	Q8TEW6	326 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	SLC39A7	Q92504	469 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	PIK3R3	Q92569	461 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	DIO2	Q92813	273 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	RFK	Q969G6	155 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	TMEM80	Q96HE8	168 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	G6PC3	Q9BUM1	346 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	TSSK6	Q9BXA6	273 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	POLDIP3	Q9BY77	421 aa	Known RBP	10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	FOLH1B	Q9HBA9	442 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	FAM60A	Q9NP50	221 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	MAN2C1	Q9NTJ4	1040 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	SEMA4G	Q9NTN9	838 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	FKBP14	Q9NWM8	211 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	DLL3	Q9NYJ7	618 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	REV1	Q9UBZ9	1251 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	PRODH2	Q9UF12	536 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	GMEB2	Q9UKD1	530 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	SLC7A7	Q9UM01	511 aa		10.02	□□□□□ -0.81
SPIDR-222	ENST00000524006	CHD6	Q8TD26	2715 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	PCDH15	Q96QU1	1955 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	CEP295	Q9C0D2	2601 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	LOC100506127	A0A0U1RQW1	187 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	CLDN24	A6NM45	220 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	CTNS	O60931	367 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	ENTPD6	O75354	484 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	CDC123	O75794	336 aa	Predicted RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	PIAS2	O75928	621 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	OR2B3	O76000	313 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	NADK	O95544	446 aa	Predicted RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	GABRB1	P18505	474 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	FPR3	P25089	353 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	GPR4	P46093	362 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	CSNK1E	P49674	416 aa	Known RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	GFER	P55789	205 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	HSD17B7	P56937	341 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	ZNF91	Q05481	1191 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	MAP4K2	Q12851	820 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	BIK	Q13323	160 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	ZNF267	Q14586	743 aa	Predicted RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	ZNF846	Q147U1	533 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	SPCS2	Q15005	226 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	NCF4	Q15080	339 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	OCLN	Q16625	522 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	MOG	Q16653	247 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	ZNF528	Q3MIS6	628 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	ARMCX4	Q5H9R4	360 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	TMEM201	Q5SNT2	666 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	SNAP47	Q5SQN1	464 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	RPL13AP3	Q6NVV1	102 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	SLC16A12	Q6ZSM3	486 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	RASSF6	Q6ZTQ3	369 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	MBOAT2	Q6ZWT7	520 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	USP43	Q70EL4	1123 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	GDF7	Q7Z4P5	450 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	COMTD1	Q86VU5	262 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	SLC34A3	Q8N130	599 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms