RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 KCNMB3Q9NPA1 279 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 NGBQ9NPG2 151 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC39A1Q9NY26 324 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 MALT1Q9UDY8 824 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 TUBGCP4Q9UGJ1 667 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 SH3GLB1Q9Y371 365 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 RNF215Q9Y6U7 377 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 SAA2-SAA4A0A096LPE2 208 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 TLCD2A6NGC4 264 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ARGFXA6NJG6 315 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 PRAMEF26H0Y7S4 382 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 K7EPI3 171 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 EEF2KO00418 725 aaKnown RBP4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ANGPT2O15123 496 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ATP6V0E1O15342 81 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 GLRA3O75311 464 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 STBD1O95210 358 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 APRTP07741 180 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 STSP08842 583 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 RALAP11233 206 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF12P17014 697 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 CYP2F1P24903 491 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 CASP14P31944 242 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 CHRNA3P32297 505 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 DLSTP36957 453 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 FUT6P51993 359 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 HMGA2P52926 109 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 HSD17B7P56937 341 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 SPAG1Q07617 926 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 C16orf72Q14CZ0 275 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 CARTPTQ16568 116 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 STX1AQ16623 288 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ACCSLQ4AC99 568 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 DCAF12Q5T6F0 453 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 RIPPLY2Q5TAB7 128 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR6B2Q6IFH4 312 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 XKRXQ6PP77 449 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 CDHR3Q6ZTQ4 885 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 CYP4V2Q6ZWL3 525 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 MARK2Q7KZI7 788 aaKnown RBP4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 OTUD6AQ7L8S5 288 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ADAMTSL2Q86TH1 951 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 EID3Q8N140 333 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 FAM89BQ8N5H3 189 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 GBP7Q8N8V2 638 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR52E1Q8NGJ3 308 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR4C15Q8NGM1 316 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 FBXO30Q8TB52 745 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ASB5Q8WWX0 329 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 RFT1Q96AA3 541 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 C4orf45Q96LM5 186 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 NDNQ99608 321 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 SPZ1Q9BXG8 430 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ACPTQ9BZG2 426 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 NMNAT2Q9BZQ4 307 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC39A8Q9C0K1 460 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 CSTL1Q9H114 145 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 POLR3FQ9H1D9 316 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 DPEP2Q9H4A9 486 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 RIBC2Q9H4K1 309 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 UPF2Q9HAU5 1272 aaKnown RBP4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 A4GALTQ9NPC4 353 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC35D1Q9NTN3 355 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 ELOVL2Q9NXB9 296 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 PLA2G4CQ9UP65 541 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 EXOC7Q9UPT5 735 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 TNNQ9UQP3 1299 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 BTRCQ9Y297 605 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 TENM1Q9UKZ4 2725 aa4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 PRKDCP78527 4128 aaKnown RBP4.17□□□□□ -1.74
HMGB1P23-201ENST00000518743 SYNJ2BP-COX16A0A087WUM0 186 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 E5RGE8 158 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC31A1O15431 190 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 PSMD3O43242 534 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 CDK2AP2O75956 126 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 DFFBO76075 338 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 CISD3P0C7P0 127 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 F3P13726 295 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 MSH3P20585 1137 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 GLRA2P23416 452 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC1A3P43003 542 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 PSMD8P48556 350 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 C21orf58P58505 322 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 RAPSNQ13702 412 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 ENPP2Q13822 863 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 TRIM29Q14134 588 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 KRT31Q15323 416 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SYCP1Q15431 976 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 ANKDD1AQ495B1 522 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 LYPLAL1Q5VWZ2 237 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 CES4AQ5XG92 561 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF549Q6P9A3 640 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SIGLEC15Q6ZMC9 328 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 COX8CQ7Z4L0 72 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 HPS6Q86YV9 775 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 APLFQ8IW19 511 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 ITPRIPQ8IWB1 547 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 STHQ8IWL8 128 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 MARVELD2Q8N4S9 558 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms