RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ZNF680Q8NEM1 530 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SNX33Q8WV41 574 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 OSTF1Q92882 214 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 MSLNLQ96KJ4 702 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 GINS4Q9BRT9 223 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 NDC1Q9BTX1 674 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 CPEB1Q9BZB8 566 aaKnown RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 KLHL31Q9H511 634 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 METTL17Q9H7H0 456 aaPredicted RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 ATP13A2Q9NQ11 1180 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ZNF69Q9UC07 566 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 FLVCR2Q9UPI3 526 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 WDR45Q9Y484 360 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 PCDHGB7Q9Y5F8 929 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 FAM86C2PA6NEL3 165 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SLC9B1P1A6NJY1 282 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 STX11O75558 287 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 KDM4BO94953 1096 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SOD1P00441 154 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 TRAPPC2P0DI81 140 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 TRAPPC2BP0DI82 140 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 ZNF33BQ06732 778 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 BTN1A1Q13410 526 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 Q6ZNB5 142 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 CREB3L2Q70SY1 520 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 RNF44Q7L0R7 432 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 DCUN1D3Q8IWE4 304 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 TMEM99Q8N816 258 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 OR8K3Q8NH51 312 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SENP5Q96HI0 755 aaPredicted RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 RNF170Q96K19 258 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 NIPAL2Q9H841 368 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 HCFC2Q9Y5Z7 792 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 LOC285556D6RIA3 1793 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 CEP290O15078 2479 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ABHD14A-ACY1A0A1B0GW23 586 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 KIAA0355O15063 1070 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SLC43A1O75387 559 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 RGS9O75916 674 aaPredicted RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 SLC22A5O76082 557 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 RECKO95980 971 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 PAK4O96013 591 aaPredicted RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 H2AFB2P0C5Z0 115 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 CLUP10909 449 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 NDUFV2P19404 249 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 CLDN20P56880 219 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 DGCR2P98153 550 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 HES5Q5TA89 166 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 TMEM215Q68D42 235 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 FAAP20Q6NZ36 180 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 FIGNL1Q6PIW4 674 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 CAMKMTQ7Z624 323 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SIAH3Q8IW03 269 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 OR5W2Q8NH69 310 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 RPLP0P6Q8NHW5 317 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 DNAJA4Q8WW22 397 aaPredicted RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 GIMAP1Q8WWP7 306 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 OTUB2Q96DC9 234 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 C4orf36Q96KX1 117 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ARHGAP9Q9BRR9 750 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SLC25A18Q9H1K4 315 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 SLC23A2Q9UGH3 650 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 STOML2Q9UJZ1 356 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ATG4BQ9Y4P1 393 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 TRAV27A0A087WT01 109 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 A0A1B0GVT2 93 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 A0A1W2PRQ8 180 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 LRRC72A6NJI9 287 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 IFNA7P01567 189 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 ALDOBP05062 364 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 PTHLHP12272 177 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 CENPAP49450 140 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 TPBGQ13641 420 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 RAB33AQ14088 237 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 GNA13Q14344 377 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 SLC25A35Q3KQZ1 300 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 TCTE3Q8IZS6 198 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 CPA6Q8N4T0 437 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 SIRT6Q8N6T7 355 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 ZNF527Q8NB42 609 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 PLA2G15Q8NCC3 412 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 OR4C6Q8NH72 309 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 GOT1L1Q8NHS2 421 aaPredicted RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 TRMT2BQ96GJ1 504 aaKnown RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 METTL2AQ96IZ6 378 aaKnown RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 TRDV1A0A1B0GX56 115 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 SLC9A3R1O14745 358 aaPredicted RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 NPC1O15118 1278 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 FZD7O75084 574 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 HOXD10P28358 340 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 MPIP34949 423 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 PSMB10P40306 273 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 SOX2P48431 317 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 OR12D2P58182 307 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 SIM1P81133 766 aaPredicted RBP11.9□□□□□ -0.5
VPS52-218ENST00000482399 TEKQ02763 1124 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 TCEAL5Q5H9L2 206 aa11.9□□□□□ -0.5
VPS52-218ENST00000482399 OR4C11Q6IEV9 310 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms