RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 RNF122Q9H9V4 155 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 CACYBPQ9HB71 228 aaKnown RBP12.98□□□□□ -0.33
HDAC1-206ENST00000476391 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
HDAC1-206ENST00000476391 DMRT1Q9Y5R6 373 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 PLXNB2O15031 1838 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 A0A1B0GTQ1 180 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 ARGFXA6NJG6 315 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 KDM4EB2RXH2 506 aaPredicted RBP12.98□□□□□ -0.33
HDAC1-206ENST00000476391 PGRMC2O15173 223 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 RNF13O43567 381 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 HYAL3O43820 417 aaPredicted RBP12.98□□□□□ -0.33
HDAC1-206ENST00000476391 PRAMEF11O60813 436 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 ARAFP10398 606 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 SPAM1P38567 509 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 RAD52P43351 418 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 MECP2P51608 486 aaKnown RBP12.98□□□□□ -0.33
HDAC1-206ENST00000476391 HMGCS2P54868 508 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 SLC5A12Q1EHB4 618 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 EIF2S3LQ2VIR3 472 aaKnown RBP12.98□□□□□ -0.33
HDAC1-206ENST00000476391 ZNF613Q6PF04 617 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 SMARCD3Q6STE5 483 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 SLC9B2Q86UD5 537 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 SERINC5Q86VE9 423 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 TMEM185AQ8NFB2 350 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 ZFPM2Q8WW38 1151 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 SPRYD4Q8WW59 207 aaPredicted RBP12.98□□□□□ -0.33
HDAC1-206ENST00000476391 ASZ1Q8WWH4 475 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 UTP23Q9BRU9 249 aaKnown RBP12.98□□□□□ -0.33
HDAC1-206ENST00000476391 SLC35A5Q9BS91 424 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 HRASLSQ9HDD0 168 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 VPS29Q9UBQ0 182 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 FBXW2Q9UKT8 454 aa12.98□□□□□ -0.33
HDAC1-206ENST00000476391 DBX1A6NMT0 343 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 DVL2O14641 736 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 TO15178 435 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 B4GALT3O60512 393 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 SERPIND1P05546 499 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 ZNF7P17097 686 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-206ENST00000476391 IDSP22304 550 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 STAT5AP42229 794 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 P2RY4P51582 365 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 CACNG1Q06432 222 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 ZNF852Q6ZMS4 543 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 THEM6Q8WUY1 208 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 SORCS1Q8WY21 1168 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 MGME1Q9BQP7 344 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 ZNF649Q9BS31 505 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 IGLV3-10A0A075B6K4 115 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 A0A0G2JK05 382 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 TRAPPC13A5PLN9 417 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 UPK3BL1B0FP48 263 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 UPK3BL2E5RIL1 263 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 STX11O75558 287 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 SAGP10523 405 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-206ENST00000476391 FPR3P25089 353 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 SHC1P29353 583 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 GPX4P36969 197 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-206ENST00000476391 CCR8P51685 355 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 CASP9P55211 416 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 AP3S2P59780 193 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 EEF1A1P68104 462 aaKnown RBP12.97□□□□□ -0.33
HDAC1-206ENST00000476391 MELKQ14680 651 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 ATP13A5Q4VNC0 1218 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 EEF1A1P5Q5VTE0 462 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 CXorf57Q6NSI4 855 aaKnown RBP12.97□□□□□ -0.33
HDAC1-206ENST00000476391 TCTN3Q6NUS6 607 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 NHLRC1Q6VVB1 395 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 CIR1Q86X95 450 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-206ENST00000476391 LRRC56Q8IYG6 542 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-206ENST00000476391 HORMAD2Q8N7B1 307 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 MFFQ9GZY8 342 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 PLEKHA1Q9HB21 404 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 NOX3Q9HBY0 568 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 CPA4Q9UI42 421 aa12.97□□□□□ -0.33
HDAC1-206ENST00000476391 RFXAPO00287 272 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 CACNB4O00305 520 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-206ENST00000476391 PHYHO14832 338 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 EIF4E2O60573 245 aaKnown RBP12.96□□□□□ -0.33
HDAC1-206ENST00000476391 NME6O75414 186 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-206ENST00000476391 IGHA1P01876 353 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 YBEYP58557 167 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-206ENST00000476391 ACTR1AP61163 376 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 ACSM2AQ08AH3 577 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 PDZK1IP1Q13113 114 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 CKAP5Q14008 2032 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 HABP2Q14520 560 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-206ENST00000476391 TMEM44Q2T9K0 475 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 ATXN7L2Q5T6C5 722 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-206ENST00000476391 ACSM2BQ68CK6 577 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 MBOAT1Q6ZNC8 495 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 MRGPREQ86SM8 312 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 WDSUB1Q8N9V3 476 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-206ENST00000476391 ASB13Q8WXK3 278 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 RFKQ969G6 155 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 WDR89Q96FK6 387 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms