RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 OR52P1PQ8NH57 321 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 RNF138Q8WVD3 245 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CANT1Q8WVQ1 401 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 APOBEC4Q8WW27 367 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 KCNE4Q8WWG9 221 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 JADE3Q92613 823 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ZNF524Q96C55 264 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 OMA1Q96E52 524 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 RMND5BQ96G75 393 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 THOC3Q96J01 351 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 VPS50Q96JG6 964 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 C7orf34Q96L11 122 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ZNF354BQ96LW1 612 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 RAB3IPQ96QF0 476 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 NODALQ96S42 347 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 RASL10BQ96S79 203 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ADOQ96SZ5 270 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 DOHHQ9BU89 302 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 LHPPQ9H008 270 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 QRSL1Q9H0R6 528 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 ING2Q9H160 280 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 MUC13Q9H3R2 512 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ZNF552Q9H707 407 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 Q9N2J8 555 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 SH2D2AQ9NP31 389 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 UBQLN4Q9NRR5 601 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CCM2LQ9NUG4 571 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 OLAHQ9NV23 265 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CALML5Q9NZT1 146 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 P2RX2Q9UBL9 471 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ANGPTL2Q9UKU9 493 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ZNF232Q9UNY5 417 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 WDR45Q9Y484 360 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 OR10H1Q9Y4A9 318 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 SNX13Q9Y5W8 968 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 KCNMB2Q9Y691 235 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 SCN2AQ99250 2005 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 SPTBN4Q9H254 2564 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 A0A087WV48 116 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 NPIPA5A0A0B4J1W7 369 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SERINC4A6NH21 518 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 ARGFXA6NJG6 315 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 A6NL46 340 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 ZNF891A8MT65 544 aaPredicted RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 B4DXG7 233 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 C5orf58C9J3I9 102 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 NPIPA7E9PJI5 369 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 H3BNX3 289 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 K7ENP7 123 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 MGRN1O60291 552 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SEMA7AO75326 666 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 BCAS1O75363 584 aaPredicted RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 ITGA10O75578 1167 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SERPINB7O75635 380 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 PPM1BO75688 479 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 OR6B1O95007 311 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 UTS2O95399 124 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SERPINA1P01009 418 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SEMG1P04279 462 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 FESP07332 822 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 C8BP07358 591 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 NGFRP08138 427 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 FBXO45P0C2W1 286 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 PABPC4LP0CB38 370 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 NPIPA8P0DM63 369 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 PRKAR1AP10644 381 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 UMPSP11172 480 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 FUT4P22083 530 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 RPS4Y1P22090 263 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 AQP1P29972 269 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 PTGDSP41222 190 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 SOX3P41225 446 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 ACAA2P42765 397 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 ERFP50548 548 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 HLCSP50747 726 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 GAS1P54826 345 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 POLE2P56282 527 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 FBXW4P57775 412 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 EEF1A1P68104 462 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 PSPHP78330 225 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 FOXK2Q01167 660 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 TLE3Q04726 772 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 ZNF155Q12901 538 aaPredicted RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 FLOT2Q14254 428 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 NTRK2Q16620 822 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 DECR1Q16698 335 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 DEFB109BQ30KR1 87 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 GRAMD1BQ3KR37 738 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 INTS11Q5TA45 600 aaKnown RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 FNDC7Q5VTL7 733 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 C1orf146Q5VVC0 180 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 INO80CQ6PI98 192 aaPredicted RBP5.46□□□□□ -1.54
USP39-213ENST00000467885 DHRS4L2Q6PKH6 230 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 OPN5Q6U736 354 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 IGFL2Q6UWQ7 119 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 ENPP6Q6UWR7 440 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 IL20RBQ6UXL0 311 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 C16orf62Q7Z3J2 963 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 HMGN2P46Q86SG4 172 aa5.46□□□□□ -1.54
USP39-213ENST00000467885 MARCH3Q86UD3 253 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms