RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 OR5J2Q8NH18 312 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 ZFP90Q8TF47 636 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 ARNTL2Q8WYA1 636 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 DTD2Q96FN9 168 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 PPP1R16AQ96I34 528 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 MARK4Q96L34 752 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 LINC00615Q96LM1 132 aaPredicted RBP4.67□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF778Q96MU6 729 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 FYTTD1Q96QD9 318 aaKnown RBP4.67□□□□□ -1.66
EPHA3-202ENST00000452448 PANX3Q96QZ0 392 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 DCLRE1CQ96SD1 692 aaKnown RBP4.67□□□□□ -1.66
EPHA3-202ENST00000452448 STACQ99469 402 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 ASCL2Q99929 193 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 EBF4Q9BQW3 602 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 OSBPL11Q9BXB4 747 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 TM6SF2Q9BZW4 377 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 PKIBQ9C010 78 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 NHEJ1Q9H9Q4 299 aaPredicted RBP4.67□□□□□ -1.66
EPHA3-202ENST00000452448 MSRAQ9UJ68 235 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 SCP2D1Q9UJQ7 156 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 FBXL4Q9UKA2 621 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 FBXL2Q9UKC9 423 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 CBLCQ9ULV8 474 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 PSG11Q9UQ72 335 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 CTNND2Q9UQB3 1225 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 MAB21L2Q9Y586 359 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 TJP1Q07157 1748 aa4.67□□□□□ -1.66
EPHA3-202ENST00000452448 TRBV11-1A0A0K0K1C0 115 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 MGAT4DA6NG13 374 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 NPIPB15A6NHN6 443 aaPredicted RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 AGAP5A6NIR3 686 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 I6L893 689 aaPredicted RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 GRM6O15303 877 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF208O43345 1280 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 BANF1O75531 89 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 KDM4BO94953 1096 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PRAMEF1O95521 474 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 C1QBP02746 253 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 CA4P22748 312 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PRDX5P30044 214 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 ADORA1P30542 326 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PBX1P40424 430 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 AKR1C3P42330 323 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TGM4P49221 684 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 SLC16A1P53985 500 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 NAPAP54920 295 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PCBP4P57723 403 aaKnown RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PRR20EP86478 221 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PRR20CP86479 221 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PRR20DP86480 221 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PRR20BP86481 221 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PRR20AP86496 221 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 CDC42EP1Q00587 391 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 B4GALNT1Q00973 533 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF616Q08AN1 781 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 BOP1Q14137 746 aaKnown RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 FASTKQ14296 549 aaKnown RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 HLFQ16534 295 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 ATP6V1FQ16864 119 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 AMZ1Q400G9 498 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 COLEC12Q5KU26 742 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 OGFRL1Q5TC84 451 aaPredicted RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 ABHD17BQ5VST6 288 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 KRT80Q6KB66 452 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 SERPINA13PQ6UXR4 307 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 HSDL2Q6YN16 418 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 ERASQ7Z444 233 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TMEM135Q86UB9 458 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 KCNMB4Q86W47 210 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TCTE3Q8IZS6 198 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TXNDC5Q8NBS9 432 aaKnown RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 BEND2Q8NDZ0 799 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 OR9Q1Q8NGQ5 310 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 SLCO2A1Q92959 643 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 MYLPFQ96A32 169 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 C3orf49Q96BT1 292 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 MSLNLQ96KJ4 702 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TEPSINQ96N21 525 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 GAD1Q99259 594 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 CHP1Q99653 195 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 SLC35A5Q9BS91 424 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 NDUFAF3Q9BU61 184 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 BHLHE41Q9C0J9 482 aaPredicted RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 NKX2-4Q9H2Z4 354 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TMEM185BQ9H7F4 350 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 AUNIPQ9H7T9 357 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 GTSE1Q9NYZ3 720 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 MED11Q9P086 117 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PIM2Q9P1W9 311 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 METTL1Q9UBP6 276 aaKnown RBP4.66□□□□□ -1.66
EPHA3-202ENST00000452448 PLEKHM1Q9Y4G2 1056 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 RIC1Q4ADV7 1423 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TIAM2Q8IVF5 1701 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 KCPQ6ZWJ8 1503 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TRAV26-1A0A087WT03 109 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 TRBV7-9A0A0J9YWB2 115 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 HEPACAM2A8MVW5 462 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 C1orf196B1AJZ1 125 aa4.66□□□□□ -1.66
EPHA3-202ENST00000452448 MKRN2OSH3BPM6 223 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms