RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 NUMBP49757 651 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 VAMP7P51809 220 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 NAGLUP54802 743 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 GPX6P59796 221 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 MYL6P60660 151 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 IFITM2Q01629 132 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 GCNT1Q02742 428 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SCN1BQ07699 218 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SMARCB1Q12824 385 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TFDP2Q14188 446 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 GNA13Q14344 377 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 GK3PQ14409 553 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PIGHQ14442 188 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PDK2Q15119 407 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 CA9Q16790 459 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 RFX4Q33E94 735 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TIMM50Q3ZCQ8 353 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC36A3Q495N2 470 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 EPC2Q52LR7 807 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 NHSL2Q5HYW2 709 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TCTE1Q5JU00 501 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 N4BP2L1Q5TBK1 243 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TTC23Q5W5X9 447 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TIGD3Q6B0B8 471 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 FAM45BPQ6NSW5 357 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PNCKQ6P2M8 343 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DNAJC24Q6P3W2 148 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ISLR2Q6UXK2 745 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 GDPD4Q6W3E5 623 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TIFABQ6ZNK6 161 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 LINC00523Q86TU6 105 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 RAB43Q86YS6 212 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TBC1D21Q8IYX1 336 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC38A6Q8IZM9 456 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 LGI2Q8N0V4 545 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 NATD1Q8N6N6 113 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 NAT8LQ8N9F0 302 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 THAP8Q8NA92 274 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR6Q1Q8NGQ2 317 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR1J1Q8NGS3 322 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR10Z1Q8NGY1 313 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 MCFD2Q8NI22 146 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 C9orf43Q8TAL5 461 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 FAM45AQ8TCE6 357 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 GRHL3Q8TE85 626 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TFB1MQ8WVM0 346 aaKnown RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 HSD17B8Q92506 261 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 RORBQ92753 470 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 NCLNQ969V3 563 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ROPN1LQ96C74 230 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TUBGCP3Q96CW5 907 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC47A1Q96FL8 570 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 CENPNQ96H22 339 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SERAC1Q96JX3 654 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF578Q96N58 590 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 CPXM1Q96SM3 734 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC29A1Q99808 456 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TMEM246Q9BRR3 403 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF577Q9BSK1 485 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 KATNB1Q9BVA0 655 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRMT61BQ9BVS5 477 aaKnown RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 KIFC1Q9BW19 673 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ILKAPQ9H0C8 392 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PPA2Q9H2U2 334 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR51B5Q9H339 312 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 FN3KQ9H479 309 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 KAT8Q9H7Z6 458 aaKnown RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 NANOGQ9H9S0 305 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PELI2Q9HAT8 420 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ABCB10Q9NRK6 738 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 AGPAT3Q9NRZ7 376 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SMOXQ9NWM0 555 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ADPRHL2Q9NX46 363 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 COQ3Q9NZJ6 369 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 MBD2Q9UBB5 411 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUX4Q9UBX2 424 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 HMGXB4Q9UGU5 601 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TEKT2Q9UIF3 430 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZDHHC2Q9UIJ5 367 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DNPEPQ9ULA0 475 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF175Q9Y473 711 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PEX16Q9Y5Y5 336 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SNED1Q8TER0 1413 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PCM1Q15154 2024 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 STRCP1A6NGW2 1772 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 CNTNAP2Q9UHC6 1331 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 NRXN2Q9P2S2 1712 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 WDR81Q562E7 1941 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 hCG_1818297A0A087WSY0 165 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 A0A1W2PN81 502 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 KRT87PA6NCN2 255 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF99A8MXY4 864 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 APOC4-APOC2K7ER74 178 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 SLC9A3R1O14745 358 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 MRASO14807 208 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 TFECO14948 347 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 XPNPEP2O43895 674 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 EXTL3O43909 919 aa4.02□□□□□ -1.77
HMGB1P16-201ENST00000447155 PLIN3O60664 434 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms