RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 VPS29Q9UBQ0 182 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANGPTL2Q9UKU9 493 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 RCE1Q9Y256 329 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 WDR37Q9Y2I8 494 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 DGKBQ9Y6T7 804 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 PCM1Q15154 2024 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 THADAQ6YHU6 1953 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A0G2JNG1 304 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPTY2D1-AS1A0A0U1RR47 76 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A1W2PP18 115 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRBC2A0A5B9 178 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMEM247A6NEH6 219 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 HMX3A6NHT5 357 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR5K4A6NMS3 321 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 MAGEB17A8MXT2 336 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 H0Y3Z8 333 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 BTN3A3O00478 584 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 FBP2O00757 339 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 NDUFS4O43181 175 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 HNRNPRO43390 633 aaKnown RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR1F1O43749 312 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 MGRN1O60291 552 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 FKBP6O75344 327 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 GMNNO75496 209 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 EEDO75530 441 aaKnown RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SEMA3DO95025 777 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 LRATO95237 230 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 PSMG1O95456 288 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 IL6P05231 212 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 BCKDHAP12694 445 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CYP4B1P13584 511 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 GNSP15586 552 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SDC1P18827 310 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TCN1P20061 433 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CD22P20273 847 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRPS1L1P21108 318 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CPOXP36551 454 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC7A2P52569 658 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 MTTPP55157 894 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CLDN8P56748 225 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TGM3Q08188 693 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF763Q0D2J5 394 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 BNIP2Q12982 314 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 C1orf61Q13536 156 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 RIPK1Q13546 671 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 FLOT2Q14254 428 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 FZD2Q14332 565 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CAPRIN1Q14444 709 aaKnown RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 HNF4GQ14541 408 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 KIR2DS5Q14953 304 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 RCN1Q15293 331 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 ELOCQ15369 112 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 HKDC1Q2TB90 917 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAM174BQ3ZCQ3 159 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 VPS26BQ4G0F5 336 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF542PQ5EBM4 170 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPANXN4Q5MJ08 99 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 WDR45BQ5MNZ6 344 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SAMD4BQ5PRF9 694 aaKnown RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TPRG1LQ5T0D9 272 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMEM268Q5VZI3 342 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 NOXRED1Q6NXP6 359 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 ABRAXAS1Q6UWZ7 409 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 WASH2PQ6VEQ5 465 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 PAGE2Q7Z2X7 111 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 R3HCC1LQ7Z5L2 792 aaKnown RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC9B2Q86UD5 537 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 GPR180Q86V85 440 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 AMIGO1Q86WK6 493 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 NUDT13Q86X67 352 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 GKN2Q86XP6 184 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 HPS6Q86YV9 775 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 FUNDC1Q8IVP5 155 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC22A18ASQ8N1D0 253 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 RNF175Q8N4F7 328 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 C1orf52Q8N6N3 182 aaKnown RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 RNF148Q8N7C7 305 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 FRMD1Q8N878 549 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 LMNTD1Q8N9Z9 388 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CADM4Q8NFZ8 388 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TTLQ8NG68 377 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR2L3Q8NG85 312 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR4E2Q8NGC2 313 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCL4L1Q8NHW4 92 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 HMGCLL1Q8TB92 370 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 WDR20Q8TBZ3 569 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC2A12Q8TD20 617 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 LMX1AQ8TE12 382 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC26A7Q8TE54 656 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC37A2Q8TED4 501 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAR1Q8WVX9 515 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMED6Q8WW62 240 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 VPS33AQ96AX1 596 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC22A18Q96BI1 424 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 LRRC58Q96CX6 371 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 WDR34Q96EX3 536 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 METTL2AQ96IZ6 378 aaKnown RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 ITCHQ96J02 903 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms