RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 LRFN5Q96NI6 719 aa14.03□□□□□ -0.16
SCAF11-204ENST00000395454 ZNF350Q9GZX5 532 aa14.03□□□□□ -0.16
SCAF11-204ENST00000395454 SAP130Q9H0E3 1048 aa14.03□□□□□ -0.16
SCAF11-204ENST00000395454 AKIRIN1Q9H9L7 192 aaPredicted RBP14.03□□□□□ -0.16
SCAF11-204ENST00000395454 ASCL3Q9NQ33 180 aa14.03□□□□□ -0.16
SCAF11-204ENST00000395454 MAN2C1Q9NTJ4 1040 aa14.03□□□□□ -0.16
SCAF11-204ENST00000395454 CHST2Q9Y4C5 530 aa14.03□□□□□ -0.16
SCAF11-204ENST00000395454 CLDN16Q9Y5I7 305 aa14.03□□□□□ -0.16
SCAF11-204ENST00000395454 DMXL2Q8TDJ6 3036 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 FAM227AF5H4B4 570 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 STMND1H3BQB6 276 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 SOX30O94993 753 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 ANGPTL1O95841 491 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 ALPPP05187 535 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 FBLP22087 321 aaKnown RBP14.02□□□□□ -0.16
SCAF11-204ENST00000395454 RPS4Y1P22090 263 aaKnown RBP14.02□□□□□ -0.16
SCAF11-204ENST00000395454 ESRRGP62508 458 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 SLC35A2P78381 396 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 IL5RAQ01344 420 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 MAP4K2Q12851 820 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 DSG2Q14126 1118 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 RTP5Q14D33 572 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 NPTX1Q15818 432 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 DUSP5Q16690 384 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 NKAIN1Q4KMZ8 207 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 TRMT12Q53H54 448 aaKnown RBP14.02□□□□□ -0.16
SCAF11-204ENST00000395454 FAM199XQ6PEV8 388 aaPredicted RBP14.02□□□□□ -0.16
SCAF11-204ENST00000395454 C6orf15Q6UXA7 325 aaPredicted RBP14.02□□□□□ -0.16
SCAF11-204ENST00000395454 C16orf62Q7Z3J2 963 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 ZNF595Q8IYB9 648 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 LINC00471Q8N535 108 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 CDRT4Q8N9R6 151 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 OR6T1Q8NGN1 323 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 MR1Q95460 341 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 TSC22D3Q99576 134 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 DGCR6LQ9BY27 220 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 B3GNT4Q9C0J1 378 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 PAK1IP1Q9NWT1 392 aaPredicted RBP14.02□□□□□ -0.16
SCAF11-204ENST00000395454 PTTG2Q9NZH5 202 aa14.02□□□□□ -0.16
SCAF11-204ENST00000395454 M0R3H8 397 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 WBP4O75554 376 aaKnown RBP14.02□□□□□ -0.17
SCAF11-204ENST00000395454 DXOO77932 396 aaKnown RBP14.02□□□□□ -0.17
SCAF11-204ENST00000395454 DLGAP3O95886 979 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 AK1P00568 194 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 THBS1P07996 1170 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 ADRB1P08588 477 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 CCNYL3P0C7X3 344 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 PAX7P23759 505 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 GSTT1P30711 240 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 CSNK2BP67870 215 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 SEC23BQ15437 767 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF385CQ66K41 422 aaPredicted RBP14.02□□□□□ -0.17
SCAF11-204ENST00000395454 TYW3Q6IPR3 259 aaKnown RBP14.02□□□□□ -0.17
SCAF11-204ENST00000395454 IGF2-ASQ6U949 168 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 CD300LDQ6UXZ3 194 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 KCTD8Q6ZWB6 473 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 OLIG3Q7RTU3 272 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 GPR141Q7Z602 305 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 SPARTQ8N0X7 666 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 TAGAPQ8N103 731 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 AQP11Q8NBQ7 271 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 SIMC1Q8NDZ2 872 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 OR51Q1Q8NH59 317 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 CNIH3Q8TBE1 160 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 APH1BQ8WW43 257 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 CDS1Q92903 461 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 PEX11GQ96HA9 241 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 SIGLEC11Q96RL6 698 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 RBCK1Q9BYM8 510 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 ADNPQ9H2P0 1102 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 MTHFD2LQ9H903 347 aaPredicted RBP14.02□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF556Q9HAH1 456 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 MGAT4BQ9UQ53 548 aa14.02□□□□□ -0.17
SCAF11-204ENST00000395454 CACNA1AO00555 2505 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 SH3PXD2BA1X283 911 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 H3BSA7 217 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 CTNSO60931 367 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 ID2Q02363 134 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 DUSP8Q13202 625 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 GTF2IRD2BQ6EKJ0 949 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 LCN10Q6JVE6 187 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 DEF8Q6ZN54 512 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 TIPARPQ7Z3E1 657 aaKnown RBP14.01□□□□□ -0.17
SCAF11-204ENST00000395454 GTF2IRD2Q86UP8 949 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 ENTHD1Q8IYW4 607 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 VANGL1Q8TAA9 524 aaPredicted RBP14.01□□□□□ -0.17
SCAF11-204ENST00000395454 SLC7A13Q8TCU3 470 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 SDF2Q99470 211 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 DOK1Q99704 481 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 ANKRD19PQ9H560 264 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 TRIM45Q9H8W5 580 aaPredicted RBP14.01□□□□□ -0.17
SCAF11-204ENST00000395454 RHCGQ9UBD6 479 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 PADI1Q9ULC6 663 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 TMCC3Q9ULS5 477 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 IFT52Q9Y366 437 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 MSRB2Q9Y3D2 182 aa14.01□□□□□ -0.17
SCAF11-204ENST00000395454 NCOR2Q9Y618 2525 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 TRIM64BA6NI03 449 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 AGAP5A6NIR3 686 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 FCMRO60667 390 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms