RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 NKX3-2P78367 333 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 XKR7Q5GH72 579 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 TMEM53Q6P2H8 277 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR51L1Q8NGJ5 315 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 BPIFA2Q96DR5 249 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 CCDC120Q96HB5 630 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF717Q9BY31 904 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 ASIC5Q9NY37 505 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 GSKIPQ9P0R6 139 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 A0A0J9YY10 115 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 NPIPA2E9PIF3 369 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 NPIPA3F8WFD2 350 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 SLC16A6O15403 523 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 CAPNS1P04632 268 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 FUT1P19526 365 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 CHMP24386 653 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 PTPRRQ15256 657 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 DEFB110Q30KQ9 67 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 FAM76BQ5HYJ3 339 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 SPIN3Q5JUX0 258 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 DESI1Q6ICB0 168 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 TMEM207Q6UWW9 146 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 PHC2Q8IXK0 858 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 HORMAD2Q8N7B1 307 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZDHHC1Q8WTX9 485 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 EPHX3Q9H6B9 360 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 VNN3Q9NY84 501 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 SLX4Q8IY92 1834 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 TPD52L2O43399 206 aaKnown RBP16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 KCNK5O95279 499 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 P2RY2P41231 377 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 RPL19P84098 196 aaKnown RBP16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 SPCS2Q15005 226 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 SGCAQ16586 387 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 TMEM205Q6UW68 189 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 USP53Q70EK8 1073 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR5W2Q8NH69 310 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR5AK2Q8NH90 309 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 SLC22A8Q8TCC7 542 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 ARL6Q9H0F7 186 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 SYT4Q9H2B2 425 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 CENPBD1B2RD01 187 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 HSD11B2P80365 405 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 RAB11BQ15907 218 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 OTUD1Q5VV17 481 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 LRRC56Q8IYG6 542 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR5K2Q8NHB8 316 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 TMEM163Q8TC26 289 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 MR1Q95460 341 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 KLHL15Q96M94 604 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 IGLV3-25P01717 112 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 SLC6A8P48029 635 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 MGAT3Q09327 533 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 GAREM2Q75VX8 874 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 TMEM151BQ8IW70 566 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 ANKLE1Q8NAG6 615 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZMYND19Q96E35 227 aaPredicted RBP16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 MSLNLQ96KJ4 702 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 HRASLS5Q96KN8 279 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 NAA50Q9GZZ1 169 aaKnown RBP16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR52D1Q9H346 318 aa16.08■□□□□ 0.17
TRAPPC11-201ENST00000334690 F5H0A9 414 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 PRAMEF26H0Y7S4 382 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 SCGB1D2O95969 90 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 MAS1P04201 325 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 PLP2Q04941 152 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF767PQ75MW2 155 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 THAP3Q8WTV1 239 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF700Q9H0M5 742 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 INPP5EQ9NRR6 644 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 CUEDC1Q9NWM3 386 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 HCFC2Q9Y5Z7 792 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 NRAPQ86VF7 1730 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 LAMB1P07942 1786 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 SMAD9O15198 467 aaKnown RBP16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 DAPP51397 102 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 SF3A2Q15428 464 aaKnown RBP16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 PGGHGQ32M88 737 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 ALG10Q5BKT4 473 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 SH2D5Q6ZV89 423 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 TMPRSS9Q7Z410 1059 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 OLIG1Q8TAK6 271 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 KLK4Q9Y5K2 254 aa16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.16
TRAPPC11-201ENST00000334690 HSPA12AO43301 675 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 OR2T1O43869 369 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 ABLIM3O94929 683 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 ALDH3B2P48448 385 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 SGSHP51688 502 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 FGL1Q08830 312 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 IRF4Q15306 451 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 P4HA3Q7Z4N8 544 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 PHOSPHO2Q8TCD6 241 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 FAM46BQ96A09 425 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 TRIM43Q96BQ3 446 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 OR7D2Q96RA2 312 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 MYO5AQ9Y4I1 1855 aaKnown RBP16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 ACP2P11117 423 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms