RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 OR2L3Q8NG85 312 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SPPL3Q8TCT6 385 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 GANCQ8TET4 914 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 POF1BQ8WVV4 589 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SUSD6Q92537 303 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 TRIM63Q969Q1 353 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SLC35A4Q96G79 324 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SLC41A3Q96GZ6 507 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 ZFYVE19Q96K21 471 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MCHR1Q99705 422 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 TRMT61BQ9BVS5 477 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 WDR26Q9H7D7 661 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 EQTNQ9NQ60 294 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 IMP3Q9NV31 184 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 NLGN3Q9NZ94 848 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 NLKQ9UBE8 527 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 TNFRSF10DQ9UBN6 386 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 APOBEC3BQ9UH17 382 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 PHF11Q9UIL8 331 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 ZNF443Q9Y2A4 671 aaPredicted RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 INSL6Q9Y581 213 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 CSNK1G3Q9Y6M4 447 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 GOLGA4Q13439 2230 aaKnown RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 C2orf92A0A1B0GVN3 265 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 ANTXRLA6NF34 631 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 CD8B2A6NJW9 211 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 RFXAPO00287 272 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 CDC42EP2O14613 210 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 DVL2O14641 736 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 RNF13O43567 381 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 ORC5O43913 435 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 RNGTTO60942 597 aaKnown RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 ZNF780AO75290 641 aaPredicted RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 RGS9O75916 674 aaPredicted RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 ZGLP1P0C6A0 271 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 CD8BP10966 210 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 ARSBP15848 533 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 NDUFV2P19404 249 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 ELK1P19419 428 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 GCGRP47871 477 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 ZNF136P52737 540 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 CTBP2P56545 445 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 GNG2P59768 71 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 RRAS2P62070 204 aaPredicted RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 ADAM15Q13444 863 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 LTB4RQ15722 352 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 FAM214AQ32MH5 1076 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 ZNF425Q6IV72 752 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 MFSD12Q6NUT3 480 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 NIPAL3Q6P499 406 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 SMARCD3Q6STE5 483 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 CXXC5Q7LFL8 322 aaKnown RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 KLBQ86Z14 1044 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 CPOQ8IVL8 374 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 GID4Q8IVV7 300 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 ACBD7Q8N6N7 88 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 MFSD9Q8NBP5 474 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 OR52E1Q8NGJ3 308 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 BRIX1Q8TDN6 353 aaKnown RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 TMEM255BQ8WV15 326 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 JPH3Q8WXH2 748 aaPredicted RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 CREB3L1Q96BA8 519 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 SAMD8Q96LT4 415 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 C10orf90Q96M02 699 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 GTPBP2Q9BX10 602 aaKnown RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 UBQLN3Q9H347 655 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 FN3KQ9H479 309 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 TRIM45Q9H8W5 580 aaPredicted RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 RMI1Q9H9A7 625 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 RPRD1BQ9NQG5 326 aaKnown RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 CYSLTR2Q9NS75 346 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 LYARQ9NX58 379 aaKnown RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 ZNF223Q9UK11 482 aaPredicted RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 OR1A2Q9Y585 309 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 SIRT4Q9Y6E7 314 aaPredicted RBP8.12□□□□□ -1.11
CLK1-201ENST00000321356 CLCA3PQ9Y6N3 262 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 CHD9Q3L8U1 2897 aa8.12□□□□□ -1.11
CLK1-201ENST00000321356 DUXAA6NLW8 204 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 ERVH48-1M5A8F1 160 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 LATO43561 262 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 HK1P19367 917 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 CD53P19397 219 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 SLC6A1P30531 599 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 CTNNB1P35222 781 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 THBS2P35442 1172 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 AGFG1P52594 562 aaKnown RBP8.11□□□□□ -1.11
CLK1-201ENST00000321356 FXYD6P3P58550 94 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 RAB8AP61006 207 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 BTG1P62324 171 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 SHC2P98077 582 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 CAMK1Q14012 370 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 IRF4Q15306 451 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 HBMQ6B0K9 141 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 CDC73Q6P1J9 531 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 SYCE2Q6PIF2 218 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 FAM111BQ6SJ93 734 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 ZNF836Q6ZNA1 936 aa8.11□□□□□ -1.11
CLK1-201ENST00000321356 LRRC28Q86X40 367 aaPredicted RBP8.11□□□□□ -1.11
CLK1-201ENST00000321356 NRROSQ86YC3 692 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms