RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MAN2C1Q9NTJ4 1040 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 NDRG4Q9ULP0 352 aaKnown RBP16.8■□□□□ 0.28
VIM-201ENST00000224237 MGAT4BQ9UQ53 548 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 GMPPBQ9Y5P6 360 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 HSPE1-MOB4S4R3N1 261 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 SH3PXD2BA1X283 911 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 CDHR4A6H8M9 788 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 TPST2O60704 377 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 IGKV1D-16P01601 117 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 PAX7P23759 505 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 PSMD4P55036 377 aaKnown RBP16.79■□□□□ 0.28
VIM-201ENST00000224237 ST3GAL3Q11203 375 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 RAPSNQ13702 412 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 SEC23BQ15437 767 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 NNATQ16517 81 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.79■□□□□ 0.28
VIM-201ENST00000224237 OVCH1Q7RTY7 1134 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 RANBP3LQ86VV4 465 aaPredicted RBP16.79■□□□□ 0.28
VIM-201ENST00000224237 ZNF321PQ8N8H1 164 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 DIO2Q92813 273 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 PITX2Q99697 317 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 MCHR1Q99705 422 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 APOL4Q9BPW4 351 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 EDEM2Q9BV94 578 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 ANKRD19PQ9H560 264 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 CTPS2Q9NRF8 586 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 COPS7AQ9UBW8 275 aa16.79■□□□□ 0.28
VIM-201ENST00000224237 CPSF4LA6NMK7 179 aaKnown RBP16.78■□□□□ 0.28
VIM-201ENST00000224237 E9PQ18 207 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 CLPTM1O96005 669 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 GASTP01350 101 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 CCKBRP32239 447 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 PPICP45877 212 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 RPL5P46777 297 aaKnown RBP16.78■□□□□ 0.28
VIM-201ENST00000224237 ISL1P61371 349 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 APOFQ13790 326 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 ENTPD8Q5MY95 495 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 FOXB2Q5VYV0 432 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 PLEKHM3Q6ZWE6 761 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 BCORP1Q8N888 145 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 TSPAN14Q8NG11 270 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 ADAMTS16Q8TE57 1224 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 GTPBP3Q969Y2 492 aaKnown RBP16.78■□□□□ 0.28
VIM-201ENST00000224237 POLR2J2Q9GZM3 115 aaKnown RBP16.78■□□□□ 0.28
VIM-201ENST00000224237 YIPF3Q9GZM5 350 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 POLR2J3Q9H1A7 115 aaKnown RBP16.78■□□□□ 0.28
VIM-201ENST00000224237 FBXO8Q9NRD0 319 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 OTOGLQ3ZCN5 2332 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 COL27A1Q8IZC6 1860 aaPredicted RBP16.78■□□□□ 0.28
VIM-201ENST00000224237 IDSB3KWA1 339 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 CYP7B1O75881 506 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 OR5F1O95221 314 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 HEXBP07686 556 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 POU2F1P14859 743 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 AGXTP21549 392 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 EPHA2P29317 976 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 UGT2B15P54855 530 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 DCAF7P61962 342 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 MC2RQ01718 297 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 TRAM2Q15035 370 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 ZNF141Q15928 474 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 DECR1Q16698 335 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 ZSWIM7Q19AV6 140 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 PDZK1Q5T2W1 519 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 PODNL1Q6PEZ8 512 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 RBM44Q6ZP01 1051 aaKnown RBP16.78■□□□□ 0.28
VIM-201ENST00000224237 SHISA6Q6ZSJ9 500 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 NAXDQ8IW45 347 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 MORN4Q8NDC4 146 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 OR1N1Q8NGS0 311 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 SLC38A4Q969I6 547 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 HRASLS5Q96KN8 279 aa16.78■□□□□ 0.28
VIM-201ENST00000224237 KIF26BQ2KJY2 2108 aa16.77■□□□□ 0.28
VIM-201ENST00000224237 WDFY3Q8IZQ1 3526 aa16.77■□□□□ 0.28
VIM-201ENST00000224237 SMIM31A0A1B0GVY4 71 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 TRIM64A6NGJ6 449 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 FRG2CA6NGY1 282 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 VSTM2BA6NLU5 285 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 MEN1O00255 615 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 ELK4P28324 431 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 ZNF136P52737 540 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 ATP12AP54707 1039 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 RPP38P78345 283 aaKnown RBP16.77■□□□□ 0.27
VIM-201ENST00000224237 IL5RAQ01344 420 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 CD47Q08722 323 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 PGBD2Q6P3X8 592 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 LANCL3Q6ZV70 420 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 ZNF614Q8N883 585 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 ZSCAN1Q8NBB4 408 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 HDAC2Q92769 488 aaKnown RBP16.77■□□□□ 0.27
VIM-201ENST00000224237 LCORQ96JN0 433 aaPredicted RBP16.77■□□□□ 0.27
VIM-201ENST00000224237 PRR14Q9BWN1 585 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 DGCR6LQ9BY27 220 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 SLC26A1Q9H2B4 701 aa16.77■□□□□ 0.27
VIM-201ENST00000224237 AKAP7Q9P0M2 348 aaPredicted RBP16.77■□□□□ 0.27
VIM-201ENST00000224237 TESQ9UGI8 421 aaKnown RBP16.77■□□□□ 0.27
VIM-201ENST00000224237 OR6C76A6NM76 312 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 NPIPB9F8W1W9 429 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 FMO6PO60774 539 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 SLC34A2O95436 690 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms