RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CBLCQ9ULV8 474 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 OR10H1Q9Y4A9 318 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 GADD45GO95257 159 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 DRD5P21918 477 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 NBL1P41271 181 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 DCAF7P61962 342 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 EPS8Q12929 822 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 RFX4Q33E94 735 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 LIN52Q52LA3 116 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 FAAH2Q6GMR7 532 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 DEF8Q6ZN54 512 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 LANCL3Q6ZV70 420 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 RAB11FIP2Q7L804 512 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 COL27A1Q8IZC6 1860 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 OR4N2Q8NGD1 307 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 OR1N1Q8NGS0 311 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 SPSB2Q99619 263 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 BARD1Q99728 777 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 WFDC6Q9BQY6 131 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 ADI1Q9BV57 179 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 COPS7AQ9UBW8 275 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 C3orf18Q9UK00 162 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 ACAD8Q9UKU7 415 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 CHST2Q9Y4C5 530 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 ORC6Q9Y5N6 252 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 COMMD3-BMI1R4GMX3 469 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 OR6C76A6NM76 312 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 FFAR1O14842 300 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 HS6ST1O60243 411 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 CNOT3O75175 753 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 SNAP29O95721 258 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 MT-CO3P00414 261 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 CDK4P11802 303 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 EEF1A1P68104 462 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 MAPK14Q16539 360 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 FLYWCH1Q4VC44 716 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 COLEC12Q5KU26 742 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 GLRX5Q86SX6 157 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 CLIP4Q8N3C7 705 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 OR6T1Q8NGN1 323 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 GIPC3Q8TF64 312 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 NR4A3Q92570 626 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 DHRS1Q96LJ7 313 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 ARMC7Q9H6L4 198 aa16.35■□□□□ 0.21
SHKBP1-224ENST00000600718 A0A0C4DFX4 3053 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 H0YAE9 185 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 CSO75390 466 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 UGT2B17O75795 530 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 IGKV1D-16P01601 117 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 NID1P14543 1247 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 ITIH1P19827 911 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 SLC5A2P31639 672 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 CAPGP40121 348 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 LIMS1P48059 325 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 RAD23AP54725 363 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 GANABQ14697 944 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 LAPTM4AQ15012 233 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 PDK3Q15120 406 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 TRIP6Q15654 476 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 MICAQ29983 383 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 SLC36A3Q495N2 470 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 STPG1Q5TH74 334 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 BCORP1Q8N888 145 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 OR52J3Q8NH60 311 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 B4GALNT2Q8NHY0 566 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 PHF10Q8WUB8 498 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 MR1Q95460 341 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 PMEPA1Q969W9 287 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 LCORQ96JN0 433 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 TAAR9Q96RI9 348 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 EVA1AQ9H8M9 152 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 AKIRIN1Q9H9L7 192 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 NMNAT1Q9HAN9 279 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 TOR4AQ9NXH8 423 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 TMEFF2Q9UIK5 374 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 KCNE5Q9UJ90 142 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 GPR179Q6PRD1 2367 aa16.34■□□□□ 0.21
SHKBP1-224ENST00000600718 FRG2CA6NGY1 282 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 C9J4A7 227 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 SEMA7AO75326 666 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 ETV5P41161 510 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 DAPP51397 102 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 PSMD4P55036 377 aaKnown RBP16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 EXOC3L2Q2M3D2 409 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 ANKRD34AQ69YU3 496 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 KDM4DQ6B0I6 523 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 FAHD1Q6P587 224 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 ZNF836Q6ZNA1 936 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 ZAR1Q86SH2 424 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 ZSCAN1Q8NBB4 408 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 CYGBQ8WWM9 190 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 ADIPOR1Q96A54 375 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 CNBD2Q96M20 576 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 DEPDC7Q96QD5 511 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 CRB3Q9BUF7 120 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 ANKRD60Q9BZ19 345 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 A4GNTQ9UNA3 340 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 PCDHGA10Q9Y5H3 936 aa16.33■□□□□ 0.21
SHKBP1-224ENST00000600718 B3GALT1Q9Y5Z6 326 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms