RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 FLYWCH1Q4VC44 716 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 VWA2Q5GFL6 755 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 FGD3Q5JSP0 725 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 CCNJQ5T5M9 372 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 PWWP2BQ6NUJ5 590 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 FIGNL1Q6PIW4 674 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
TPM1-215ENST00000558868 COX15Q7KZN9 410 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 OVCH1Q7RTY7 1134 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 THAP5Q7Z6K1 395 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 RANBP3LQ86VV4 465 aaPredicted RBP12.79□□□□□ -0.36
TPM1-215ENST00000558868 OFCC1Q8IZS5 231 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 SLC5A8Q8N695 610 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 MORN4Q8NDC4 146 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 OR4D11Q8NGI4 311 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 OR6T1Q8NGN1 323 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 C16orf52Q8NHV5 167 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 TSLPQ969D9 159 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 FEVQ99581 238 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 APOL4Q9BPW4 351 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 MRPS26Q9BYN8 205 aaKnown RBP12.79□□□□□ -0.36
TPM1-215ENST00000558868 VN1R1Q9GZP7 353 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 QRSL1Q9H0R6 528 aaKnown RBP12.79□□□□□ -0.36
TPM1-215ENST00000558868 ING2Q9H160 280 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 RIBC2Q9H4K1 309 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 FBXO8Q9NRD0 319 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.79□□□□□ -0.36
TPM1-215ENST00000558868 COPS7AQ9UBW8 275 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 A4GNTQ9UNA3 340 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 OR10H1Q9Y4A9 318 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 DMXL1Q9Y485 3027 aa12.79□□□□□ -0.36
TPM1-215ENST00000558868 CCDC88CQ9P219 2028 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 OR2W5A6NFC9 320 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 OR6C76A6NM76 312 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 H3BNH8 94 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 HRKO00198 91 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 BCKDKO14874 412 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 PCDH17O14917 1159 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 EPPINO95925 133 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ADAP00813 363 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 HEXBP07686 556 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 GNAO1P09471 354 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ZGLP1P0C6A0 271 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ELAVL4P26378 380 aaKnown RBP12.78□□□□□ -0.36
TPM1-215ENST00000558868 LCN1P31025 176 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 CCKBRP32239 447 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 RYKP34925 604 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 PIGAP37287 484 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 IFNGR2P38484 337 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 PPICP45877 212 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 SLC37A1P57057 533 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 TAS2R41P59536 307 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 E2F1Q01094 437 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ST3GAL3Q11203 375 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ILKQ13418 452 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 TOP3AQ13472 1001 aaPredicted RBP12.78□□□□□ -0.36
TPM1-215ENST00000558868 TRAM2Q15035 370 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ZNF836Q6ZNA1 936 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 GALNT5Q7Z7M9 940 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 RBM45Q8IUH3 476 aaKnown RBP12.78□□□□□ -0.36
TPM1-215ENST00000558868 LACC1Q8IV20 430 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ZNF786Q8N393 782 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 STT3BQ8TCJ2 826 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 METTL21AQ8WXB1 218 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 SLC38A4Q969I6 547 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 SLC35B4Q969S0 331 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 ZG16BQ96DA0 208 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 MUS81Q96NY9 551 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 CDC6Q99741 560 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 RSPO3Q9BXY4 272 aaPredicted RBP12.78□□□□□ -0.36
TPM1-215ENST00000558868 GABARAPL3Q9BY60 117 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 GRIP2Q9C0E4 1043 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 HOXD1Q9GZZ0 328 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 OCIAD1Q9NX40 245 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 RHCGQ9UBD6 479 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 CBLCQ9ULV8 474 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 GPR55Q9Y2T6 319 aaPredicted RBP12.78□□□□□ -0.36
TPM1-215ENST00000558868 PCDHGA10Q9Y5H3 936 aa12.78□□□□□ -0.36
TPM1-215ENST00000558868 MAP1BP46821 2468 aaKnown RBP12.78□□□□□ -0.36
TPM1-215ENST00000558868 A8MUA0 341 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 B4E171 279 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 FMO6PO60774 539 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 MITFO75030 526 aaPredicted RBP12.77□□□□□ -0.37
TPM1-215ENST00000558868 OR5F1O95221 314 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 IGKV3-11P04433 115 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 DRD5P21918 477 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 CBLP22681 906 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 TSPAN7P41732 249 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 UGT2B15P54855 530 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 NPRL3Q12980 569 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 PIN1Q13526 163 aaPredicted RBP12.77□□□□□ -0.37
TPM1-215ENST00000558868 ZNF141Q15928 474 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 DECR1Q16698 335 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.77□□□□□ -0.37
TPM1-215ENST00000558868 ZNF691Q5VV52 312 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 HLA-DQA1Q5Y7H0 255 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 ANKRD34AQ69YU3 496 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 NPSR1Q6W5P4 371 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 PLEKHM3Q6ZWE6 761 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms