RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TMEM19Q96HH6 336 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 RBCK1Q9BYM8 510 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 TWSG1Q9GZX9 223 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 TMEM184BQ9Y519 407 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 ARFGEF2Q9Y6D5 1785 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 TARM1B6A8C7 271 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ANHXE9PGG2 379 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 F11P03951 625 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ZNF16P17020 682 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 MAB21L1Q13394 359 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 HACD4Q5VWC8 232 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 CPT1CQ8TCG5 803 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 SORCS1Q8WY21 1168 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 UPRTQ96BW1 309 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 MVB12AQ96EY5 273 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 TIMD4Q96H15 378 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 SLC39A13Q96H72 371 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 SARDHQ9UL12 918 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 SIGLEC6O43699 453 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 CDC123O75794 336 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 VNN2O95498 520 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 OSMP13725 252 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 CPT2P23786 658 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 C17orf67Q0P5P2 114 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 TAZQ16635 292 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ZNF404Q494X3 552 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 SLC36A2Q495M3 483 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ATAD3CQ5T2N8 411 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 FAM83HQ6ZRV2 1179 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 SERPINA11Q86U17 422 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 NAXEQ8NCW5 288 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 OR5B2Q96R09 309 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 SLC30A2Q9BRI3 323 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 CCDC86Q9H6F5 360 aaKnown RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 GAREM1Q9H706 876 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ELOVL3Q9HB03 270 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 HEBP1Q9NRV9 189 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 TRBV11-1A0A0K0K1C0 115 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ARNTLO00327 626 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 SYT7O43581 403 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 HCRTO43612 131 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 LCATP04180 440 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 TP53P04637 393 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 ZNF888P0CJ79 500 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 RNASE12Q5GAN4 147 aaKnown RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 LRFN4Q6PJG9 635 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 OR1J4Q8NGS1 313 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 UBTD2Q8WUN7 234 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 RSC1A1Q92681 617 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ZNF700Q9H0M5 742 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 KLF13Q9Y2Y9 288 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 LRRC30A6NM36 301 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 CPMP14384 443 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 ZNF182P17025 639 aaPredicted RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 MSX2P35548 267 aaPredicted RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 ARL3P36405 182 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 ACVR1BP36896 505 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 ART1P52961 327 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 NUDT6P53370 316 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 BORCS7Q96B45 105 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 TMEM9BQ9NQ34 198 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 TMLHEQ9NVH6 421 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 KIF13AQ9H1H9 1805 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 CTHP32929 405 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 AKIRIN2Q53H80 203 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 EGFLAMQ63HQ2 1017 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 LCN8Q6JVE9 175 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 C6orf15Q6UXA7 325 aaPredicted RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 CD200R1Q8TD46 325 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 PRRC1Q96M27 445 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 SECISBP2Q96T21 854 aaKnown RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 TMED9Q9BVK6 235 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 RBM24Q9BX46 236 aaKnown RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 PRSS16Q9NQE7 514 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 PRMT8Q9NR22 394 aaPredicted RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 MOKQ9UQ07 419 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 UBE2J1Q9Y385 318 aaPredicted RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 OR6C76A6NM76 312 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 K7ERQ8 282 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 RASAL1O95294 804 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 AOAHP28039 575 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 SLC5A2P31639 672 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 TRA2AQ13595 282 aaKnown RBP eCLIP11.28□□□□□ -0.6
NEK9-210ENST00000557026 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 ZNF542PQ5EBM4 170 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 NKAPLQ5M9Q1 402 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 NLRP8Q86W28 1048 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 GPR148Q8TDV2 347 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 KIR3DX1Q9H7L2 352 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 ENAMQ9NRM1 1142 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 CDC14CA4D256 554 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 NKX6-3A6NJ46 265 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 CDRT1O95170 752 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 RPS17P08708 135 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms