RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-204	ENST00000474025	FADS1	O60427	444 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ERAL1	O75616	437 aa	Known RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	SIX3	O95343	332 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CLDN9	O95484	217 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	LTA4H	P09960	611 aa	Known RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CTAGE8	P0CG41	777 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ARAF	P10398	606 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	BMP4	P12644	408 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GFAP	P14136	432 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	HK1	P19367	917 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CSNK2A2	P19784	350 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	IL11	P20809	199 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	SSTR1	P30872	391 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	DEK	P35659	375 aa	Known RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	KRT20	P35900	424 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ALDH18A1	P54886	795 aa	Known RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	RPS3A	P61247	264 aa	Known RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	PSPH	P78330	225 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	DR1	Q01658	176 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GALNT1	Q10472	559 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	FAP	Q12884	760 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	STX5	Q13190	355 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GTF2H2	Q13888	395 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	SLMAP	Q14BN4	828 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	PFKFB4	Q16877	469 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	TMEM44	Q2T9K0	475 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CTU2	Q2VPK5	515 aa	Known RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	TMEM249	Q2WGJ8	235 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	PGGHG	Q32M88	737 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ZNF672	Q499Z4	452 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ZNF628	Q5EBL2	1059 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CCNYL2	Q5T2Q4	361 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	FRG2	Q64ET8	278 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GTF2H2C	Q6P1K8	395 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	BHLHB9	Q6PI77	547 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	SEZ6L2	Q6UXD5	910 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	BEND4	Q6ZU67	534 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	RAPH1	Q70E73	1250 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	PAGE2	Q7Z2X7	111 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	COMMD6	Q7Z4G1	85 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ATG4D	Q86TL0	474 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GAS2L3	Q86XJ1	694 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CTAGE4	Q8IX94	777 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	METTL4	Q8N3J2	472 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	OR4N2	Q8NGD1	307 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	OR52B6	Q8NGF0	335 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	OR9A2	Q8NGT5	310 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	RHEBL1	Q8TAI7	183 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ZNF675	Q8TD23	568 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	TRPC4AP	Q8TEL6	797 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	SMAP2	Q8WU79	429 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CDKL2	Q92772	493 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GFM2	Q969S9	779 aa	Known RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	TM4SF18	Q96CE8	201 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	NXNL1	Q96CM4	212 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	KLHL29	Q96CT2	875 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ERP27	Q96DN0	273 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ZMYND19	Q96E35	227 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	C1GALT1C1	Q96EU7	318 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	C11orf24	Q96F05	449 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ADGRG7	Q96K78	797 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	FRG2B	Q96QU4	278 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	RTN4R	Q9BZR6	473 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	STMN4	Q9H169	189 aa	Predicted RBP	4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	IPPK	Q9H8X2	491 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	FOLH1B	Q9HBA9	442 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	LRTM1	Q9HBL6	345 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	TMEM160	Q9NX00	188 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	FLRT3	Q9NZU0	649 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	MED11	Q9P086	117 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	PPP4R1L	Q9P1A2	415 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	WHRN	Q9P202	907 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	SNX12	Q9UMY4	172 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	ABCG2	Q9UNQ0	655 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GPR52	Q9Y2T5	361 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	AP4B1	Q9Y6B7	739 aa		4.58	□□□□□ -1.68
SNRNP40-204	ENST00000474025	UQCRHL	A0A096LP55	91 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	IGLV3-32	A0A0A0MS00	114 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025		A0A1W2PP18	115 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CCDC189	A1A4V9	331 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	PLOD3	O60568	738 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GUCY1B2	O75343	617 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	GCM2	O75603	506 aa	Predicted RBP	4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	BCAS2	O75934	225 aa	Predicted RBP	4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	PLG	P00747	810 aa	Predicted RBP	4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CD8A	P01732	235 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CD3E	P07766	207 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CRABP2	P29373	138 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	AGTR1	P30556	359 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	SPR	P35270	261 aa	Predicted RBP	4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	EIF1AX	P47813	144 aa	Known RBP	4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CCNG1	P51959	295 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	PNLIPRP2	P54317	469 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CASP9	P55211	416 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	CTBP2	P56545	445 aa		4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	MRPS22	P82650	360 aa	Known RBP	4.57	□□□□□ -1.68
SNRNP40-204	ENST00000474025	VLDLR	P98155	873 aa		4.57	□□□□□ -1.68

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