RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	GALNT10	Q86SR1	603 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	LRRC34	Q8IZ02	419 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	COX18	Q8N8Q8	333 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	CDRT4	Q8N9R6	151 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	OR56A1	Q8NGH5	318 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	PIK3R3	Q92569	461 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	FAM120B	Q96EK7	910 aa	Known RBP	11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	OR52B2	Q96RD2	323 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	NODAL	Q96S42	347 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	CXorf36	Q9H7Y0	433 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	GALNT9	Q9HCQ5	603 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	PNPLA3	Q9NST1	481 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	CNOT11	Q9UKZ1	510 aa	Known RBP	11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	PCDHGB3	Q9Y5G1	929 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	NIN	Q8N4C6	2090 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	TACC2	O95359	2948 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	FREM3	P0C091	2139 aa		11.62	□□□□□ -0.55
FDPS-204	ENST00000461507	RNF103-CHMP3	A0A140T963	221 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	GXYLT2	A0PJZ3	443 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	ANKRD33B	A6NCL7	494 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	NPIPA2	E9PIF3	369 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	NPIPA3	F8WFD2	350 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	T	O15178	435 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	ABCB7	O75027	752 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	WDR1	O75083	606 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	IDO1	P14902	403 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	NAGA	P17050	411 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	CAPN3	P20807	821 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	ENDOU	P21128	410 aa	Known RBP	11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	TCEA1	P23193	301 aa	Known RBP	11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	CHI3L1	P36222	383 aa	Predicted RBP	11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	CASP3	P42574	277 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	FRK	P42685	505 aa	Predicted RBP	11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	TRPC1	P48995	793 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	PSMD4	P55036	377 aa	Known RBP	11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	PSPH	P78330	225 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	PSG6	Q00889	435 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.61	□□□□□ -0.55	4e-15	■■□□□ 14
FDPS-204	ENST00000461507	GAB1	Q13480	694 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	ANXA8L1	Q5VT79	327 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	RTL6	Q6ICC9	239 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	FIGNL1	Q6PIW4	674 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	MEX3B	Q6ZN04	569 aa	Known RBP	11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	RIMKLA	Q8IXN7	391 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	CLEC4F	Q8N1N0	589 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	OR1J4	Q8NGS1	313 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	ACTRT2	Q8TDY3	377 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	NTNG2	Q96CW9	530 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	COQ8B	Q96D53	544 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	C16orf58	Q96GQ5	468 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	SLC35G5	Q96KT7	338 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	MCCC2	Q9HCC0	563 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	NPHS2	Q9NP85	383 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	ZFP64	Q9NPA5	681 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	TCF7L2	Q9NQB0	619 aa		11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.61	□□□□□ -0.55
FDPS-204	ENST00000461507	SPG11	Q96JI7	2443 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	OR6C70	A6NIJ9	312 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	GMFG	O60234	142 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	ICOSLG	O75144	302 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	SLC22A3	O75751	556 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	SNX4	O95219	450 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	HMGN2	P05204	90 aa	Known RBP	11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	HOXD4	P09016	255 aa	Predicted RBP	11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	ACP2	P11117	423 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	CYP4B1	P13584	511 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	POU3F2	P20265	443 aa	Predicted RBP	11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	MAN2A2	P49641	1150 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	CLK3	P49761	638 aa	Known RBP	11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	DGKQ	P52824	942 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	CASP9	P55211	416 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	KRTAP10-9	P60411	292 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	RPS26	P62854	115 aa	Known RBP	11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	HBA1	P69905	142 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	MLC1	Q15049	377 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	DPY19L1	Q2PZI1	675 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	CYP27C1	Q4G0S4	372 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	MFSD12	Q6NUT3	480 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	BHLHB9	Q6PI77	547 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	B3GNT6	Q6ZMB0	384 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	MIER2	Q8N344	545 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	ADAMTS15	Q8TE58	950 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	HGD	Q93099	445 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	TESC	Q96BS2	214 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	MOAP1	Q96BY2	351 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	SARAF	Q96BY9	339 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	OR52E6	Q96RD3	313 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	SECISBP2	Q96T21	854 aa	Known RBP	11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	EBF4	Q9BQW3	602 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	TTYH2	Q9BSA4	534 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	LMF2	Q9BU23	707 aa	Known RBP	11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	ANGPTL4	Q9BY76	406 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	TBL1XR1	Q9BZK7	514 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	ACKR4	Q9NPB9	350 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	MED4	Q9NPJ6	270 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	SPRR3	Q9UBC9	169 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	DCTN4	Q9UJW0	460 aa		11.6	□□□□□ -0.55
FDPS-204	ENST00000461507	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.59	□□□□□ -0.55
FDPS-204	ENST00000461507	TRGV5	A0A0B4J1U4	118 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms