RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TCEA1P23193 301 aaKnown RBP16.06■□□□□ 0.16
LSM5-204ENST00000409909 DPP4P27487 766 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 HPCAL1P37235 193 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 RFX3P48380 749 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 LHX2P50458 406 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 B3GALT5-AS1P59052 145 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 ABCE1P61221 599 aaKnown RBP16.06■□□□□ 0.16
LSM5-204ENST00000409909 MLC1Q15049 377 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 APOOLQ6UXV4 268 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 MARCH3Q86UD3 253 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 RIMKLAQ8IXN7 391 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 ZNF781Q8N8C0 355 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 CDRT4Q8N9R6 151 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 RELL2Q8NC24 303 aaPredicted RBP16.06■□□□□ 0.16
LSM5-204ENST00000409909 SLC16A11Q8NCK7 471 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 OR2M3Q8NG83 312 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 FBXO30Q8TB52 745 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 ZPLD1Q8TCW7 415 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 DUSP19Q8WTR2 217 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 TUBGCP3Q96CW5 907 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 RMND5BQ96G75 393 aaPredicted RBP16.06■□□□□ 0.16
LSM5-204ENST00000409909 SORT1Q99523 831 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 TUBA1CQ9BQE3 449 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 G6PC3Q9BUM1 346 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 CALHM2Q9HA72 323 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 C3orf14Q9HBI5 128 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 FAM120CQ9NX05 1096 aaKnown RBP16.06■□□□□ 0.16
LSM5-204ENST00000409909 MED11Q9P086 117 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 PPP4R1LQ9P1A2 415 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 MRTO4Q9UKD2 239 aaKnown RBP16.06■□□□□ 0.16
LSM5-204ENST00000409909 CCDC168Q8NDH2 2452 aa16.06■□□□□ 0.16
LSM5-204ENST00000409909 CELSR1Q9NYQ6 3014 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 MBD3L4A6NDZ8 208 aaPredicted RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 MBD3L3A6NE82 208 aaPredicted RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 MBD3L5A6NJ08 208 aaPredicted RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 KCNH1O95259 989 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 IL2RAP01589 272 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 TUBBP07437 444 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 BMP5P22003 454 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 GCKP35557 465 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 ZNF136P52737 540 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 DSCR4P56555 118 aaPredicted RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 TLE4Q04727 773 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 SRYQ05066 204 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 STX5Q13190 355 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 SF3B4Q15427 424 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■□□□□ 10.3
LSM5-204ENST00000409909 DUSP5Q16690 384 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 GRAMD1BQ3KR37 738 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 VPS26BQ4G0F5 336 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 EXOSC6Q5RKV6 272 aaKnown RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 CPTPQ5TA50 214 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 MFSD12Q6NUT3 480 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 ENPP6Q6UWR7 440 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 PLXDC2Q6UX71 529 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 SZRD1Q7Z422 152 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 ADGRE4PQ86SQ3 457 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 GALNT10Q86SR1 603 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 OR4K17Q8NGC6 315 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 MBD3L2Q8NHZ7 208 aaPredicted RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 FAM110BQ8TC76 370 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 SLC9A6Q92581 669 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 COQ8BQ96D53 544 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 FAM120BQ96EK7 910 aaKnown RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 OTUB1Q96FW1 271 aaPredicted RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 PGM2Q96G03 612 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 MS4A4EQ96PG1 132 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 YIPF4Q9BSR8 244 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 KCNK9Q9NPC2 374 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 DKKL1Q9UK85 242 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 RPH3AQ9Y2J0 694 aaPredicted RBP16.05■□□□□ 0.16
LSM5-204ENST00000409909 ACTL7BQ9Y614 415 aa16.05■□□□□ 0.16
LSM5-204ENST00000409909 ANKHD1Q8IWZ3 2542 aaKnown RBP16.04■□□□□ 0.16
LSM5-204ENST00000409909 SPG11Q96JI7 2443 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 A0A1W2PRB8 838 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 ZWINTO95229 277 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 G6PDP11413 515 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 BGNP21810 368 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 CHMP24386 653 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 SLC1A6P48664 564 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 PSMD4P55036 377 aaKnown RBP16.04■□□□□ 0.16
LSM5-204ENST00000409909 CLDN18P56856 261 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 EMX2Q04743 252 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 PDCD2Q16342 344 aaPredicted RBP16.04■□□□□ 0.16
LSM5-204ENST00000409909 AAGABQ6PD74 315 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 ZAR1Q86SH2 424 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 C9orf106Q8NAJ2 232 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 OR4C3Q8NH37 302 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 PPP1R36Q96LQ0 422 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 SFXN2Q96NB2 322 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 AKTIPQ9H8T0 292 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 SDHAF3Q9NRP4 125 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 FBXO34Q9NWN3 711 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 ZNF629Q9UEG4 869 aaPredicted RBP16.04■□□□□ 0.16
LSM5-204ENST00000409909 RAP2CQ9Y3L5 183 aa16.04■□□□□ 0.16
LSM5-204ENST00000409909 ANKRD17O75179 2603 aaKnown RBP16.04■□□□□ 0.16
LSM5-204ENST00000409909 H0Y3Z8 333 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 SYT5O00445 386 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 DVL2O14641 736 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 KCNK2O95069 426 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 ZNF708P17019 499 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms