RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 VRK2Q86Y07 508 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 ARL14Q8N4G2 192 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 ZNF615Q8N8J6 731 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 DVL3Q92997 716 aaPredicted RBP8.3□□□□□ -1.08
RTN4-206ENST00000394611 C16orf58Q96GQ5 468 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 LINC00052Q96N35 136 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 MCHR1Q99705 422 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 PLA2G12AQ9BZM1 189 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 ISG20L2Q9H9L3 353 aaKnown RBP8.3□□□□□ -1.08
RTN4-206ENST00000394611 ACOXLQ9NUZ1 547 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 ASF1BQ9NVP2 202 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 KLK4Q9Y5K2 254 aa8.3□□□□□ -1.08
RTN4-206ENST00000394611 ARPC4-TTLL3A0A0A6YYG9 625 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 A0A1B0GVI7 797 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 METTL21EPA6NDL7 271 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 OR2AT4A6NND4 320 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 CACNB4O00305 520 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 CHST10O43529 356 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 RP2O75695 350 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 C1QBP02746 253 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 PCCBP05166 539 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 ENPP1P22413 925 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 UGT2B10P36537 528 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 RPS27P42677 84 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 SKP1P63208 163 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 TGM3Q08188 693 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 CDONQ4KMG0 1287 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 OR6T1Q8NGN1 323 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 OR4K13Q8NH42 304 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 PEX13Q92968 403 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 BHLHE41Q9C0J9 482 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 PARP12Q9H0J9 701 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 RANBP3Q9H6Z4 567 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 EXO5Q9H790 373 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 CXorf36Q9H7Y0 433 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 PCDHB16Q9NRJ7 776 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 ATXN7L1Q9ULK2 861 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 TRAV27A0A087WT01 109 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 HYKKA2RU49 373 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SLC9B1P1A6NJY1 282 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 MRPS14O60783 128 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 EPHB3P54753 998 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 LIM2P55344 173 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 FXYD6P3P58550 94 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 ZNF630Q2M218 657 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 GFOD2Q3B7J2 385 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SPATS1Q496A3 300 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 HSD17B12Q53GQ0 312 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 OR2AP1Q8NGE2 309 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 GPR150Q8NGU9 434 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SETD6Q8TBK2 473 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 C16orf78Q8WTQ4 265 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 RFKQ969G6 155 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SLC39A13Q96H72 371 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 LMF1Q96S06 567 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 B3GNT4Q9C0J1 378 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SLC52A3Q9NQ40 469 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 NOP16Q9Y3C1 178 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 STON1Q9Y6Q2 735 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 V9GYH0 126 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 C5orf51A6NDU8 294 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 OR6C75A6NL08 312 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 CFDP00746 253 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 TCRBP04435 133 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 DBIP07108 87 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 PRR35P0CG20 571 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 PTPN2P17706 415 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 POU3F2P20265 443 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 IL32P24001 234 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 MMP11P24347 488 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 AQP2P41181 271 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 MNDAP41218 407 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 PITPNBP48739 271 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SMIM11AP58511 58 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 OPCMLQ14982 345 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SMAD2Q15796 467 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 DMRTC1Q5HYR2 192 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 KIAA1211LQ6NV74 962 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 LIX1LQ8IVB5 337 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 TMEFF1Q8IYR6 380 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 ARMC10Q8N2F6 343 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 TMEM185AQ8NFB2 350 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 OR6M1Q8NGM8 313 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 OR4C6Q8NH72 309 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SLC25A46Q96AG3 418 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 CXorf58Q96LI9 332 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 DCLRE1CQ96SD1 692 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 SDHCQ99643 169 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 ALG8Q9BVK2 526 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 MIXL1Q9H2W2 232 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 MED11Q9P086 117 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 RPS6KB2Q9UBS0 482 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 ATPIF1Q9UII2 106 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 BTNL2Q9UIR0 455 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 KCNK6Q9Y257 313 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 CABIN1Q9Y6J0 2220 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 A0A0B4J293 547 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 FAM86C2PA6NEL3 165 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 EEF1E1-BLOC1S5C9J1V9 151 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 CCSO14618 274 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms