RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 LRRN3E7EW58 273 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 NPIPA7E9PJI5 369 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 H3BNC9 293 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 NPIPA8P0DM63 369 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 LAMP1P11279 417 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 HOXD9P28356 352 aaPredicted RBP14.04□□□□□ -0.16
LRRK1-201ENST00000388948 IST1P53990 364 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 EXOSC7Q15024 291 aaKnown RBP14.04□□□□□ -0.16
LRRK1-201ENST00000388948 RPS26P11Q5JNZ5 115 aaPredicted RBP14.04□□□□□ -0.16
LRRK1-201ENST00000388948 MOCOSQ96EN8 888 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 C16orf58Q96GQ5 468 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 LRRN3Q9H3W5 708 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 SLC35A3Q9Y2D2 325 aa14.04□□□□□ -0.16
LRRK1-201ENST00000388948 MMP2P08253 660 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 EIF2B1Q14232 305 aaKnown RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 PLEKHN1Q494U1 663 aaPredicted RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 HS3ST5Q8IZT8 346 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ZC3HAV1LQ96H79 300 aaKnown RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 DMRT3Q9NQL9 472 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 FAM86C1Q9NVL1 165 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 IL17CQ9P0M4 197 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ZNF223Q9UK11 482 aaPredicted RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 BAIAP2Q9UQB8 552 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 PET100P0DJ07 73 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ARHGAP19Q14CB8 494 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ATXN7L3Q14CW9 347 aaPredicted RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 WDR53Q7Z5U6 358 aaPredicted RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 RAB39BQ96DA2 213 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 PBX4Q9BYU1 374 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ZBP1Q9H171 429 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 HAO2Q9NYQ3 351 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 HSFX1Q9UBD0 423 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 LRRC37A3O60309 1634 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 GFRA2O00451 464 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 SMAD4Q13485 552 aaKnown RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ZBTB8BQ8NAP8 495 aaPredicted RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 RFT1Q96AA3 541 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 FAM118AQ9NWS6 357 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 CMAHPQ9Y471 501 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ANTXRLA6NF34 631 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 KLF11O14901 512 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ZXDBP98169 803 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 MAT1AQ00266 395 aaKnown RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 FOXC1Q12948 553 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 FCRLBQ6BAA4 426 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 ZNF585AQ6P3V2 769 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 PLBD1Q6P4A8 553 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 C15orf39Q6ZRI6 1047 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 OR51L1Q8NGJ5 315 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 FAM46BQ96A09 425 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 PGAP3Q96FM1 320 aaPredicted RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 COG8Q96MW5 612 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 PRSS16Q9NQE7 514 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 PCDHGA10Q9Y5H3 936 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 A0A087WUU8 490 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 M0R036 132 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 SRPX2O60687 465 aaPredicted RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 HNRNPA0Q13151 305 aaKnown RBP14.03□□□□□ -0.16
LRRK1-201ENST00000388948 LRRC37A5PQ49AS3 106 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 PIGWQ7Z7B1 504 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 TSPEARQ8WU66 669 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 CDC6Q99741 560 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 SLC7A7Q9UM01 511 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 CTSCP53634 463 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 RPE65Q16518 533 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 XKRXQ6PP77 449 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 DCDC5Q6ZRR9 648 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 KLBQ86Z14 1044 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 BORCS6Q96GS4 357 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 SLC6A17Q9H1V8 727 aa14.03□□□□□ -0.16
LRRK1-201ENST00000388948 EDN1P05305 212 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 RPS3P23396 243 aaKnown RBP eCLIP14.02□□□□□ -0.16
LRRK1-201ENST00000388948 CTHP32929 405 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 ERMP1Q7Z2K6 904 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 SENP5Q96HI0 755 aaPredicted RBP14.02□□□□□ -0.16
LRRK1-201ENST00000388948 LRR1Q96L50 414 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 OR4K3Q96R72 315 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 SORBS1Q9BX66 1292 aaKnown RBP14.02□□□□□ -0.16
LRRK1-201ENST00000388948 OR10A5Q9H207 317 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 OR10A2Q9H208 303 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 NUP98P52948 1817 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 KCNK5O95279 499 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 IFNA5P01569 189 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 EIF2S3LQ2VIR3 472 aaKnown RBP14.02□□□□□ -0.16
LRRK1-201ENST00000388948 TMEM240Q5SV17 173 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 XKR5Q6UX68 686 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 ZNF775Q96BV0 537 aaPredicted RBP14.02□□□□□ -0.16
LRRK1-201ENST00000388948 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.02□□□□□ -0.16
LRRK1-201ENST00000388948 HTRA2O43464 458 aaPredicted RBP14.02□□□□□ -0.16
LRRK1-201ENST00000388948 GKN3PP0CG01 181 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 GLO1Q04760 184 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 TXNDC15Q96J42 360 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 PLEKHA3Q9HB20 300 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 RNF6Q9Y252 685 aa14.02□□□□□ -0.16
LRRK1-201ENST00000388948 LOC105369274A0A096LPK9 316 aa14.02□□□□□ -0.17
LRRK1-201ENST00000388948 GSTT2P0CG29 244 aa14.02□□□□□ -0.17
LRRK1-201ENST00000388948 FGF3P11487 239 aaPredicted RBP14.02□□□□□ -0.17
LRRK1-201ENST00000388948 RGS6P49758 472 aa14.02□□□□□ -0.17
LRRK1-201ENST00000388948 RAB12Q6IQ22 244 aa14.02□□□□□ -0.17
LRRK1-201ENST00000388948 OR4N4Q8N0Y3 316 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms