RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MZT2AQ6P582 158 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 ZNF322Q6U7Q0 402 aaPredicted RBP8.14□□□□□ -1.11
CLK1-201ENST00000321356 MBOAT2Q6ZWT7 520 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 ABI3BPQ7Z7G0 1075 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 NKAIN4Q8IVV8 208 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 UBE2J2Q8N2K1 259 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 YIPF7Q8N8F6 280 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 NUP43Q8NFH3 380 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 BBS1Q8NFJ9 593 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 TOR1AIP2Q8NFQ8 470 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 ACOT12Q8WYK0 555 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 UPRTQ96BW1 309 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 C12orf66Q96MD2 445 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 RAB11FIP5Q9BXF6 653 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 HDHD5Q9BXW7 423 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 CRISPLD2Q9H0B8 497 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 XKR8Q9H6D3 395 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 NTMQ9P121 344 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 SLC13A4Q9UKG4 626 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 CDH10Q9Y6N8 788 aa8.14□□□□□ -1.11
CLK1-201ENST00000321356 SLC19A2O60779 497 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 NFATC1O95644 943 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 CH25HO95992 272 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 C1QBP02746 253 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 STATHP02808 62 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 HMGN1P05114 100 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 POU2F2P09086 479 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 C8orf89P0DMQ9 161 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 PSKH1P11801 424 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 HOXB3P14651 431 aaPredicted RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 CERS1P27544 350 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 TEAD1P28347 426 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 IFNA8P32881 189 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MPIP34949 423 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 DRD3P35462 400 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 VIPR2P41587 438 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MC3RP41968 323 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 GPR4P46093 362 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 AVPR1BP47901 424 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MTNR1BP49286 362 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 ERVK-21P61565 698 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 ABATP80404 500 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MADCAM1Q13477 382 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 INSL4Q14641 139 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 PAMR1Q6UXH9 720 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 RRM2BQ7LG56 351 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 GDF7Q7Z4P5 450 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 NANOGNBQ7Z5D8 188 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 GLCCI1Q86VQ1 547 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 NR2C2APQ86WQ0 139 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 PLCZ1Q86YW0 608 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 NRMQ8IXM6 262 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SIRT6Q8N6T7 355 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 OR2T33Q8NG76 320 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 OR9A2Q8NGT5 310 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SPRYD4Q8WW59 207 aaPredicted RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 TRIM43Q96BQ3 446 aaPredicted RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 SECISBP2Q96T21 854 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 TIMP4Q99727 224 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MACROD1Q9BQ69 325 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 TIMM29Q9BSF4 260 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 TEX12Q9BXU0 123 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 ACTRT3Q9BYD9 372 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SYNPO2LQ9H987 977 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 TBC1D17Q9HA65 648 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MRPS30Q9NP92 439 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 PRSS16Q9NQE7 514 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 HINT3Q9NQE9 182 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 MBNL1Q9NR56 388 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 WDR70Q9NW82 654 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 KLHL28Q9NXS3 571 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 PCDH10Q9P2E7 1040 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MALT1Q9UDY8 824 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 ADAM30Q9UKF2 790 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 NTNG1Q9Y2I2 539 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 MRPS23Q9Y3D9 190 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 DOCK9Q9BZ29 2069 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 FAM240BA0A1B0GVZ2 78 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 GSAPA4D1B5 854 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 OR6C70A6NIJ9 312 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 GTPBP1O00178 669 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 SOCS6O14544 535 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 HRO43593 1189 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 PIP5K1CO60331 668 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 FCMRO60667 390 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SLC2A10O95528 541 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 PEBP1P30086 187 aaKnown RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 IL12RB1P42701 662 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 RNF144AP50876 292 aaPredicted RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 PDX1P52945 283 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 RGS8P57771 180 aaPredicted RBP8.13□□□□□ -1.11
CLK1-201ENST00000321356 IL18Q14116 193 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 AGBL4Q5VU57 503 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 FRRS1Q6ZNA5 592 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 PLEKHM3Q6ZWE6 761 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 C16orf62Q7Z3J2 963 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 C11orf74Q86VG3 221 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 FAM20CQ8IXL6 584 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 FBXL6Q8N531 539 aa8.13□□□□□ -1.11
CLK1-201ENST00000321356 SRFBP1Q8NEF9 429 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms