RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ZAR1Q86SH2 424 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 YRDCQ86U90 279 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 MARCH3Q86UD3 253 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 RPRMLQ8N4K4 120 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 MARVELD2Q8N4S9 558 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 COX18Q8N8Q8 333 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 OR4A15Q8NGL6 344 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 SFXN5Q8TD22 340 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 RTN4RQ9BZR6 473 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 FBXO34Q9NWN3 711 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 FAM120CQ9NX05 1096 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 ALKBH4Q9NXW9 302 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 FBXL2Q9UKC9 423 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 FAF1Q9UNN5 650 aaPredicted RBP16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 COL12A1Q99715 3063 aa16.37■□□□□ 0.21
SNRPA1-201ENST00000254193 B4DXG7 233 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 CPSF4O95639 269 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 COL8A1P27658 744 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 DGKQP52824 942 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 RPS26P62854 115 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 GRAMD1BQ3KR37 738 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 CCNJQ5T5M9 372 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 WLSQ5T9L3 541 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 CDC73Q6P1J9 531 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 EPGNQ6UW88 154 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 APOOLQ6UXV4 268 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 RPTNQ6XPR3 784 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 EID3Q8N140 333 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 FAM83FQ8NEG4 500 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 FAM110BQ8TC76 370 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 CDS1Q92903 461 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 BTBD2Q9BX70 525 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 ACTRT3Q9BYD9 372 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 PIGUQ9H490 435 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 PCDHGB4Q9UN71 923 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 ABCG2Q9UNQ0 655 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 KCNE3Q9Y6H6 103 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 CROCCQ5TZA2 2017 aa16.36■□□□□ 0.21
SNRPA1-201ENST00000254193 ACVR2AP27037 513 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 SMSP52788 366 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 POU6F2P78424 691 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 DPY19L1Q2PZI1 675 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 C6orf120Q7Z4R8 191 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 ZNF808Q8N4W9 903 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 VPS37AQ8NEZ2 397 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 OR4C3Q8NH37 302 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 ADAMTS15Q8TE58 950 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 DUSP19Q8WTR2 217 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 PHF10Q8WUB8 498 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 CKAP2Q8WWK9 683 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 MOAP1Q96BY2 351 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 STACQ99469 402 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 ZBTB18Q99592 522 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 TIMP4Q99727 224 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 DSN1Q9H410 356 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 DUSP22Q9NRW4 184 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 PPP4R1LQ9P1A2 415 aa16.35■□□□□ 0.21
SNRPA1-201ENST00000254193 RNF103-CHMP3A0A140T963 221 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 FIGNL2A6NMB9 653 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 UBDO15205 165 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 KRT16P08779 473 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 IDO1P14902 403 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 BMP7P18075 431 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 TCEA1P23193 301 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 CLK3P49761 638 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 CRYZQ08257 329 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 PMPCAQ10713 525 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 CDSNQ15517 529 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 RTL6Q6ICC9 239 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 BHLHB9Q6PI77 547 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 OR4K17Q8NGC6 315 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 OR14L1PQ8NHC6 308 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 TBL1XR1Q9BZK7 514 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 OR2B2Q9GZK3 357 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 ACBD3Q9H3P7 528 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 SERHL2Q9H4I8 314 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 SDHAF3Q9NRP4 125 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 GIN1Q9NXP7 522 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 TAS2R10Q9NYW0 307 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 MED11Q9P086 117 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 FAM215AQ9Y5M1 114 aa16.34■□□□□ 0.21
SNRPA1-201ENST00000254193 SPTBN1Q01082 2364 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 SLC22A3O75751 556 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 TGDSO95455 350 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 PGRP06401 933 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 DPP4P27487 766 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 SRD5A2P31213 254 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 IDH3AP50213 366 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 CASP9P55211 416 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 PDCD4Q53EL6 469 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 DCST1Q5T197 706 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 VASNQ6EMK4 673 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 TMEM211Q6ICI0 200 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 XKRXQ6PP77 449 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 ACAD11Q709F0 780 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 FADS6Q8N9I5 356 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 OR2M3Q8NG83 312 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 OR5D16Q8NGK9 328 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 MAGEB18Q96M61 343 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms