RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 ISOC1Q96CN7 298 aa21.04■□□□□ 0.96
CDX1-201ENST00000231656 ZG16BQ96DA0 208 aa21.04■□□□□ 0.96
CDX1-201ENST00000231656 ARHGDIGQ99819 225 aa21.04■□□□□ 0.96
CDX1-201ENST00000231656 RBCK1Q9BYM8 510 aa21.04■□□□□ 0.96
CDX1-201ENST00000231656 RASSF1Q9NS23 344 aa21.04■□□□□ 0.96
CDX1-201ENST00000231656 TPRKBQ9Y3C4 175 aa21.04■□□□□ 0.96
CDX1-201ENST00000231656 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.03■□□□□ 0.96
CDX1-201ENST00000231656 PLOD3O60568 738 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 SCRG1O75711 98 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 SEC14L2O76054 403 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 POU2F1P14859 743 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 NT5EP21589 574 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 KRT20P35900 424 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 FOXD4Q12950 439 aaPredicted RBP21.03■□□□□ 0.96
CDX1-201ENST00000231656 PIN1Q13526 163 aaPredicted RBP21.03■□□□□ 0.96
CDX1-201ENST00000231656 IL11RAQ14626 422 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 DUSP5Q16690 384 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 PRICKLE4Q2TBC4 344 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 ZNF311Q5JNZ3 666 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 C1orf189Q5VU69 101 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 GTF2IRD2BQ6EKJ0 949 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 FRRS1Q6ZNA5 592 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 GLRX5Q86SX6 157 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 GTF2IRD2Q86UP8 949 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 BPHLQ86WA6 291 aaPredicted RBP21.03■□□□□ 0.96
CDX1-201ENST00000231656 RNF31Q96EP0 1072 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 PHOX2BQ99453 314 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 SLC7A5P2Q9GIP4 190 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 MAT2BQ9NZL9 334 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 ENOPH1Q9UHY7 261 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 CHST2Q9Y4C5 530 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 GVINP1Q7Z2Y8 2422 aa21.03■□□□□ 0.96
CDX1-201ENST00000231656 A0A1W2PRQ8 180 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 FCMRO60667 390 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 UGT2B17O75795 530 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 ADAP00813 363 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 FGF5P12034 268 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 CCL4P13236 92 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 DCKP27707 260 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 PCSK6P29122 969 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 GSSP48637 474 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 DSG2Q14126 1118 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 DGCR6Q14129 220 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 ARHGAP11BQ3KRB8 267 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 VRK2Q86Y07 508 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 SLC38A9Q8NBW4 561 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 DOK4Q8TEW6 326 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 SLC9A6Q92581 669 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 PRRC1Q96M27 445 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 ZNF304Q9HCX3 659 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 MAN2C1Q9NTJ4 1040 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 SCN3BQ9NY72 215 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 MGAT4BQ9UQ53 548 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 MRPS33Q9Y291 106 aaKnown RBP21.02■□□□□ 0.96
CDX1-201ENST00000231656 SNX5Q9Y5X3 404 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 FAM186AA6NE01 2351 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 POLR1CO15160 346 aaPredicted RBP21.02■□□□□ 0.96
CDX1-201ENST00000231656 ATXN8OSP0DMR3 200 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 PCMT1P22061 227 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 PRKAR1BP31321 381 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 MC2RQ01718 297 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 ERV3-1Q14264 604 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 CDCP2Q5VXM1 449 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 DHRS4L2Q6PKH6 230 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 ASCL5Q7RTU5 278 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 DEFB124Q8NES8 71 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 ZNF420Q8TAQ5 688 aaPredicted RBP21.02■□□□□ 0.96
CDX1-201ENST00000231656 FAM81AQ8TBF8 368 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 SLC7A13Q8TCU3 470 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 MPP4Q96JB8 637 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 CTRCQ99895 268 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 PIGUQ9H490 435 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 ERVK-18Q9QC07 812 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 PCDHGB1Q9Y5G3 927 aa21.02■□□□□ 0.96
CDX1-201ENST00000231656 KNTC1P50748 2209 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 SH3PXD2BA1X283 911 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 BLACEA4D250 179 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 DLL1O00548 723 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 FBLP22087 321 aaKnown RBP21.01■□□□□ 0.95
CDX1-201ENST00000231656 CLDN6P56747 220 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 HPCAP84074 193 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 MLIPQ5VWP3 458 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 TYW3Q6IPR3 259 aaKnown RBP21.01■□□□□ 0.95
CDX1-201ENST00000231656 ZNF595Q8IYB9 648 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 RHOXF1Q8NHV9 184 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 ZFAND2BQ8WV99 257 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 MUL1Q969V5 352 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 CTHRC1Q96CG8 243 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 DOK1Q99704 481 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 CMKLR1Q99788 373 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 LHPPQ9H008 270 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 ADAP2Q9NPF8 381 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 FBXO8Q9NRD0 319 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 ZNF226Q9NYT6 803 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 REV1Q9UBZ9 1251 aa21.01■□□□□ 0.95
CDX1-201ENST00000231656 GPR55Q9Y2T6 319 aaPredicted RBP21.01■□□□□ 0.95
CDX1-201ENST00000231656 FAM20BO75063 409 aa21■□□□□ 0.95
CDX1-201ENST00000231656 CDC123O75794 336 aaPredicted RBP21■□□□□ 0.95
CDX1-201ENST00000231656 CT62P0C5K7 136 aa21■□□□□ 0.95
CDX1-201ENST00000231656 SLC35E2P0CK97 266 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms