RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 NUP214P35658 2090 aaPredicted RBP20.59■□□□□ 0.89
CCDC9-204ENST00000599398 SCO2O43819 266 aa20.59■□□□□ 0.89
CCDC9-204ENST00000599398 GRK2P25098 689 aa20.59■□□□□ 0.89
CCDC9-204ENST00000599398 OR14L1PQ8NHC6 308 aa20.59■□□□□ 0.89
CCDC9-204ENST00000599398 GPR151Q8TDV0 419 aa20.59■□□□□ 0.89
CCDC9-204ENST00000599398 ABTB1Q969K4 478 aaPredicted RBP20.59■□□□□ 0.89
CCDC9-204ENST00000599398 C20orf27Q9GZN8 174 aa20.59■□□□□ 0.89
CCDC9-204ENST00000599398 NKX2-6A6NCS4 301 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 TTC36A6NLP5 189 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 KCNH1O95259 989 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 BMP7P18075 431 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 EVI2BP34910 448 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 PTGER4P35408 488 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 PSMD4P55036 377 aaKnown RBP20.58■□□□□ 0.89
CCDC9-204ENST00000599398 MAD2L1Q13257 205 aaPredicted RBP20.58■□□□□ 0.89
CCDC9-204ENST00000599398 STX3Q13277 289 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 VPS26BQ4G0F5 336 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 CPTPQ5TA50 214 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 VASNQ6EMK4 673 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 MCEMP1Q8IX19 187 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 PM20D2Q8IYS1 436 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 KRTCAP2Q8N6L1 136 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 LILRB4Q8NHJ6 448 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 FBXO30Q8TB52 745 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 PIK3R3Q92569 461 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 SLC9A6Q92581 669 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 DTNBP1Q96EV8 351 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 MS4A4EQ96PG1 132 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 PRPF18Q99633 342 aaKnown RBP20.58■□□□□ 0.89
CCDC9-204ENST00000599398 UGT2B28Q9BY64 529 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 UCK2Q9BZX2 261 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 ATAD3AQ9NVI7 634 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 PPP4R1LQ9P1A2 415 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 FBXL2Q9UKC9 423 aa20.58■□□□□ 0.89
CCDC9-204ENST00000599398 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.58■□□□□ 0.89
CCDC9-204ENST00000599398 A0A0G2JNJ9 132 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 A0A1W2PRB8 838 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 GXYLT2A0PJZ3 443 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 AHRRA9YTQ3 701 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 EMC8O43402 210 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 SNUPNO95149 360 aaKnown RBP20.57■□□□□ 0.88
CCDC9-204ENST00000599398 IL33O95760 270 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 LAMP1P11279 417 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 KIR3DL1P43629 444 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 ZFP36L2P47974 494 aaKnown RBP20.57■□□□□ 0.88
CCDC9-204ENST00000599398 RPL14P50914 215 aaKnown RBP20.57■□□□□ 0.88
CCDC9-204ENST00000599398 NHSL2Q5HYW2 709 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 CDRT4Q8N9R6 151 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 OR4K17Q8NGC6 315 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 MGARPQ8TDB4 240 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 RMND5BQ96G75 393 aaPredicted RBP20.57■□□□□ 0.88
CCDC9-204ENST00000599398 SORT1Q99523 831 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 OR2B2Q9GZK3 357 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 KCNJ16Q9NPI9 418 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 NOP53Q9NZM5 478 aaKnown RBP20.57■□□□□ 0.88
CCDC9-204ENST00000599398 FLRT3Q9NZU0 649 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 Q9UFV3 132 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 DKKL1Q9UK85 242 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 SNX8Q9Y5X2 465 aa20.57■□□□□ 0.88
CCDC9-204ENST00000599398 ABCA12Q86UK0 2595 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 TMEM120BA0PK00 339 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 FAM47E-STBD1D6RA91 191 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 G6PDP11413 515 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 PRF1P14222 555 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 PRPS1L1P21108 318 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 TCEA1P23193 301 aaKnown RBP20.56■□□□□ 0.88
CCDC9-204ENST00000599398 ADH7P40394 386 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 CLK3P49761 638 aaKnown RBP20.56■□□□□ 0.88
CCDC9-204ENST00000599398 GAS1P54826 345 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 PRR5P85299 388 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 EMX2Q04743 252 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 STX5Q13190 355 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 BEND6Q5SZJ8 279 aaPredicted RBP20.56■□□□□ 0.88
CCDC9-204ENST00000599398 DCST1Q5T197 706 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 IFNEQ86WN2 208 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 KIRREL3Q8IZU9 778 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 NUDT8Q8WV74 236 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 RNF138Q8WVD3 245 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 PRDM14Q9GZV8 571 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 TAS2R10Q9NYW0 307 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 NTMQ9P121 344 aa20.56■□□□□ 0.88
CCDC9-204ENST00000599398 HCFC1P51610 2035 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 C17orf51A8MQB3 221 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 FADS1O60427 444 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 ACTL6AO96019 429 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 SRD5A2P31213 254 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 BST1Q10588 318 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 MLC1Q15049 377 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 SF3B4Q15427 424 aaKnown RBP eCLIP20.55■□□□□ 0.882e-7■■■■□ 23.9
CCDC9-204ENST00000599398 ACSF3Q4G176 576 aaPredicted RBP20.55■□□□□ 0.88
CCDC9-204ENST00000599398 GALNT10Q86SR1 603 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 JADE3Q92613 823 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 FAM120BQ96EK7 910 aaKnown RBP20.55■□□□□ 0.88
CCDC9-204ENST00000599398 GIMAP5Q96F15 307 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 CHMP6Q96FZ7 201 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 WDYHV1Q96HA8 205 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 YIPF4Q9BSR8 244 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 AKTIPQ9H8T0 292 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 SDHAF3Q9NRP4 125 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms