RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 DNAJB12Q9NXW2 375 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 ITGB1BP2Q9UKP3 347 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 MAPRE3Q9UPY8 281 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 TMED5Q9Y3A6 229 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 CELSR1Q9NYQ6 3014 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 AKAP9Q99996 3911 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 CSMD2Q7Z408 3487 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 A0A1W2PPM1 405 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 FAM221AA4D161 298 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 A6NNC1 897 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 TBX19O60806 448 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 RCBTB2O95199 551 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 JUNP05412 331 aaKnown RBP6.9□□□□□ -1.3
NPC1-208ENST00000590301 TMIGD3P0DMS9 266 aaPredicted RBP6.9□□□□□ -1.3
NPC1-208ENST00000590301 ZNF708P17019 499 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 KRT4P19013 534 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 GRK2P25098 689 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 DPP4P27487 766 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 LCN1P31025 176 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 EVI2BP34910 448 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 MC3RP41968 323 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 EIF1AXP47813 144 aaKnown RBP6.9□□□□□ -1.3
NPC1-208ENST00000590301 MMP16P51512 607 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 DGKQP52824 942 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 DIO3P55073 304 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 PSG6Q00889 435 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 OCRLQ01968 901 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 BTKQ06187 659 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 GLYR1Q49A26 553 aaPredicted RBP6.9□□□□□ -1.3
NPC1-208ENST00000590301 DCST1Q5T197 706 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 FAM180BQ6P0A1 224 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 MYO7BQ6PIF6 2116 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 NPSR1Q6W5P4 371 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 TRIM42Q8IWZ5 723 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 ZZZ3Q8IYH5 903 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 CCDC63Q8NA47 563 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 CHDHQ8NE62 594 aaPredicted RBP6.9□□□□□ -1.3
NPC1-208ENST00000590301 OR4K17Q8NGC6 315 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 ZFP28Q8NHY6 868 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 CDC26Q8NHZ8 85 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 UBLCP1Q8WVY7 318 aaPredicted RBP6.9□□□□□ -1.3
NPC1-208ENST00000590301 SFXN2Q96NB2 322 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 AMDHD1Q96NU7 426 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 CCT7Q99832 543 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 FOXC2Q99958 501 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 TUBA1CQ9BQE3 449 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 EBPLQ9BY08 206 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 POLDIP3Q9BY77 421 aaKnown RBP6.9□□□□□ -1.3
NPC1-208ENST00000590301 CLEC4MQ9H2X3 399 aaPredicted RBP6.9□□□□□ -1.3
NPC1-208ENST00000590301 PTGES2Q9H7Z7 377 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 LRTM1Q9HBL6 345 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 C1orf109Q9NX04 203 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 CRIM1Q9NZV1 1036 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 JKAMPQ9P055 326 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 DKKL1Q9UK85 242 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 CBLCQ9ULV8 474 aa6.9□□□□□ -1.3
NPC1-208ENST00000590301 PKDREJQ9NTG1 2253 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 IGLV3-32A0A0A0MS00 114 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 TUBAL3A6NHL2 446 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 EEF1E1-BLOC1S5C9J1V9 151 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 UPK1AO00322 258 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 AZIN1O14977 448 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 PDPK1O15530 556 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 EEF1E1O43324 174 aaKnown RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 HCRTR2O43614 444 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 FADS1O60427 444 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 ZIC3O60481 467 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 SEC22BO75396 215 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 KCNH1O95259 989 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 HSPA4LO95757 839 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 IL33O95760 270 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 SHBGP04278 402 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 NGFRP08138 427 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 EPXP11678 715 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 PEPDP12955 493 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 SERPINB5P36952 375 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 RPL3P39023 403 aaKnown RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 ASMTP46597 345 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 SLCO1A2P46721 670 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 LHX2P50458 406 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 GAS1P54826 345 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 FOXA1P55317 472 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 SLC18A2Q05940 514 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 FGFBP1Q14512 234 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 KIAA0040Q15053 153 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 TMEM107Q6UX40 140 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 CHMP1BQ7LBR1 199 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 R3HCC1LQ7Z5L2 792 aaKnown RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 CAMKMTQ7Z624 323 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 GRAMD2AQ8IUY3 354 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 MEIOBQ8N635 442 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 FADS6Q8N9I5 356 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 C9orf106Q8NAJ2 232 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 CEP70Q8NHQ1 597 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 EFHD2Q96C19 240 aaPredicted RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 MTERF3Q96E29 417 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 ELP4Q96EB1 424 aa6.89□□□□□ -1.31
NPC1-208ENST00000590301 ZBED6CLQ96FA7 236 aaPredicted RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 RMND5BQ96G75 393 aaPredicted RBP6.89□□□□□ -1.31
NPC1-208ENST00000590301 FCRL1Q96LA6 429 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms