RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SFTPA2Q8IWL1 248 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 VWA5B2Q8N398 1253 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 MORN4Q8NDC4 146 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 OR7G1Q8NGA0 311 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 OR4K5Q8NGD3 323 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 OR4D11Q8NGI4 311 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 GPR151Q8TDV0 419 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 FAR1Q8WVX9 515 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 APH1BQ8WW43 257 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 ACOT11Q8WXI4 607 aaPredicted RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 RIT1Q92963 219 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 DGAT2Q96PD7 388 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 OR1F2PQ96R84 312 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 SIGLEC11Q96RL6 698 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 COPS4Q9BT78 406 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 LHPPQ9H008 270 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 ADAP2Q9NPF8 381 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 RASSF1Q9NS23 344 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 SOHLH2Q9NX45 425 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 ZNF226Q9NYT6 803 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 ERVK-18Q9QC07 812 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 RHCGQ9UBD6 479 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 REV1Q9UBZ9 1251 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 PRODH2Q9UF12 536 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 WARS2Q9UGM6 360 aaKnown RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 RPL36Q9Y3U8 105 aaKnown RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 FANCMQ8IYD8 2048 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 A0A0A6YYC8 382 aaPredicted RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 A0A1W2PS29 197 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 H3BMQ9 156 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 I3L1I5 382 aaPredicted RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 DYRK3O43781 588 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 KIAA0513O60268 411 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 BRINP1O60477 761 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 FCMRO60667 390 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 PRAMEF2O60811 474 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 EPPINO95925 133 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 CDK1P06493 297 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 NID1P14543 1247 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 POU2F1P14859 743 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 ACVR2AP27037 513 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 GABRA3P34903 492 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 TRHRP34981 398 aaPredicted RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 STT3AP46977 705 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 SMSP52788 366 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 EEF1A1P68104 462 aaKnown RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 SLC13A2Q13183 592 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 NCF4Q15080 339 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 SEC23BQ15437 767 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 TMEM201Q5SNT2 666 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 C12orf73Q69YU5 71 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 WDR74Q6RFH5 385 aaPredicted RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 RASSF6Q6ZTQ3 369 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 PLEKHM3Q6ZWE6 761 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 PRSS41Q7RTY9 318 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 DGLUCYQ7Z3D6 616 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 PRSS42Q7Z5A4 293 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 WDR5BQ86VZ2 330 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 VRK2Q86Y07 508 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 GRAMD2AQ8IUY3 354 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 CMIPQ8IY22 773 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 TMEFF1Q8IYR6 380 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 STX19Q8N4C7 294 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 CLDN22Q8N7P3 220 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 TMEM52Q8NDY8 209 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 OR5T3Q8NGG3 340 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 PIGXQ8TBF5 258 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 DIO2Q92813 273 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 GGHQ92820 318 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 HS6ST2Q96MM7 605 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 COG8Q96MW5 612 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 TGM7Q96PF1 710 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 MCHR1Q99705 422 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 DPYSL5Q9BPU6 564 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 G6PC3Q9BUM1 346 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 RSPO3Q9BXY4 272 aaPredicted RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 POLDIP3Q9BY77 421 aaKnown RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 ALOXE3Q9BYJ1 711 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 HOXD1Q9GZZ0 328 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 SLC25A19Q9HC21 320 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 ACOT13Q9NPJ3 140 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 NECTIN3Q9NQS3 549 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 PAK1IP1Q9NWT1 392 aaPredicted RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 IRAK4Q9NWZ3 460 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 GMEB2Q9UKD1 530 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 RNF215Q9Y6U7 377 aa9.68□□□□□ -0.86
VPS25-203ENST00000589520 MDC1Q14676 2089 aaKnown RBP9.68□□□□□ -0.86
VPS25-203ENST00000589520 MN1Q10571 1320 aaPredicted RBP9.67□□□□□ -0.86
VPS25-203ENST00000589520 EPG5Q9HCE0 2579 aa9.67□□□□□ -0.86
VPS25-203ENST00000589520 IGHV1OR21-1A0A087WYE8 117 aa9.67□□□□□ -0.86
VPS25-203ENST00000589520 HTR3EA5X5Y0 456 aa9.67□□□□□ -0.86
VPS25-203ENST00000589520 CLDN24A6NM45 220 aa9.67□□□□□ -0.86
VPS25-203ENST00000589520 FAM227AF5H4B4 570 aa9.67□□□□□ -0.86
VPS25-203ENST00000589520 H3BN98 237 aa9.67□□□□□ -0.86
VPS25-203ENST00000589520 SLC22A1O15245 554 aa9.67□□□□□ -0.86
VPS25-203ENST00000589520 CNOT3O75175 753 aaKnown RBP9.67□□□□□ -0.86
VPS25-203ENST00000589520 CBX7O95931 251 aa9.67□□□□□ -0.86
VPS25-203ENST00000589520 MT-ND2P03891 347 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms