RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ERLIN1O75477 346 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 SKAP2O75563 359 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 SRD5A2P31213 254 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 EVI2BP34910 448 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 MANFP55145 182 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 STX5Q13190 355 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 GAB1Q13480 694 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 SNTB1Q13884 538 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 CHI3L2Q15782 390 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 CYP27C1Q4G0S4 372 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 ZNF385BQ569K4 471 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 BEND6Q5SZJ8 279 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 NSUN5P2Q63ZY6 315 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 AAGABQ6PD74 315 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 ENPP6Q6UWR7 440 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 RNF165Q6ZSG1 346 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 TMEM200AQ86VY9 491 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 TRIM42Q8IWZ5 723 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 ANKRD42Q8N9B4 389 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 SFXN2Q96NB2 322 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 TREX2Q9BQ50 279 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 OR2B2Q9GZK3 357 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 C3orf14Q9HBI5 128 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 MCCC2Q9HCC0 563 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 TMED5Q9Y3A6 229 aa11.55□□□□□ -0.56
NPLOC4-213ENST00000573519 PHF3Q92576 2039 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 C17orf51A8MQB3 221 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 TMEM114B3SHH9 223 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 NPIPB8E9PQR5 432 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 PEX11AO75192 247 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 KCNH1O95259 989 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 PSMG1O95456 288 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 HSPA4LO95757 839 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 SERPINE1P05121 402 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 PRPS2P11908 318 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 BCKDHAP12694 445 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 EFNA1P20827 205 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 DPP4P27487 766 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 MAPK1P28482 360 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 GABRA3P34903 492 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 TIMP3P35625 211 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 SERPINB5P36952 375 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 STARP49675 285 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 CLK3P49761 638 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 AGFG1P52594 562 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 DGKQP52824 942 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 PSMD4P55036 377 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 RELL2Q8NC24 303 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 NUP43Q8NFH3 380 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 FBXO30Q8TB52 745 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 GPR151Q8TDV0 419 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 PIK3R3Q92569 461 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 SLC9A6Q92581 669 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 ZBED6CLQ96FA7 236 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 LRRC46Q96FV0 321 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 PGM2Q96G03 612 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 FCRL1Q96LA6 429 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 PPP3R2Q96LZ3 170 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 C3orf30Q96M34 536 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 PAIP2Q9BPZ3 127 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 TUBA1CQ9BQE3 449 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 LMF2Q9BU23 707 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 C1orf50Q9BV19 199 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 DSN1Q9H410 356 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 SSU72Q9NP77 194 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 SDHAF3Q9NRP4 125 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 FLRT3Q9NZU0 649 aa11.54□□□□□ -0.56
NPLOC4-213ENST00000573519 APCP25054 2843 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 GXYLT2A0PJZ3 443 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 CD8B2A6NJW9 211 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 EEF1E1-BLOC1S5C9J1V9 151 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 TM9SF1O15321 606 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 EEF1E1O43324 174 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 GMFGO60234 142 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ZWINTO95229 277 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 IL33O95760 270 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 MYZAPP0CAP1 466 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 DHRS4L1P0CG22 281 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 CPN1P15169 458 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 DDX5P17844 614 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 CAPN3P20807 821 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 BGNP21810 368 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 CEACAM8P31997 349 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 HPCAL1P37235 193 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ASMTP46597 345 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ASCL1P50553 236 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ZNF136P52737 540 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 GAS1P54826 345 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 GFRA1P56159 465 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 DLX5P56178 289 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ABCE1P61221 599 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 VPS26BQ4G0F5 336 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ATP6AP1LQ52LC2 224 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ARSKQ6UWY0 536 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 PLXDC2Q6UX71 529 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 R3HCC1LQ7Z5L2 792 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 GALNT10Q86SR1 603 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 CROCCP2Q86T23 111 aa11.53□□□□□ -0.56
NPLOC4-213ENST00000573519 ZZZ3Q8IYH5 903 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms