RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 DUSP5Q16690 384 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 LSM12Q3MHD2 195 aaKnown RBP10.8□□□□□ -0.68
RAB5C-204ENST00000547517 VPS26BQ4G0F5 336 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 TIGD3Q6B0B8 471 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 NXNQ6DKJ4 435 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 HIST2H2BCQ6DN03 193 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 OR4F3Q6IEY1 312 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 OGFOD2Q6N063 350 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 RPTNQ6XPR3 784 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 MAMDC2Q7Z304 686 aaPredicted RBP10.8□□□□□ -0.68
RAB5C-204ENST00000547517 MAVSQ7Z434 540 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 CAMKMTQ7Z624 323 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 GALNT10Q86SR1 603 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 LRRC34Q8IZ02 419 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 CLECL1Q8IZS7 167 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 EID3Q8N140 333 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 NATD1Q8N6N6 113 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 CDRT4Q8N9R6 151 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 OR5AK3PQ8NH89 298 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 LRRC8CQ8TDW0 803 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 DYDC1Q8WWB3 177 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 ITLN2Q8WWU7 325 aaPredicted RBP10.8□□□□□ -0.68
RAB5C-204ENST00000547517 CHMP6Q96FZ7 201 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 C16orf58Q96GQ5 468 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 UBQLN3Q9H347 655 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 TP63Q9H3D4 680 aaPredicted RBP10.8□□□□□ -0.68
RAB5C-204ENST00000547517 CXorf36Q9H7Y0 433 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 SERHLQ9NQF3 203 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 AIG1Q9NVV5 245 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 NTMQ9P121 344 aa10.8□□□□□ -0.68
RAB5C-204ENST00000547517 MRTO4Q9UKD2 239 aaKnown RBP10.8□□□□□ -0.68
RAB5C-204ENST00000547517 SPTAN1Q13813 2472 aaKnown RBP10.8□□□□□ -0.68
RAB5C-204ENST00000547517 USP9YO00507 2555 aaPredicted RBP10.79□□□□□ -0.68
RAB5C-204ENST00000547517 DIDO1Q9BTC0 2240 aaKnown RBP10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ZNF407Q9C0G0 2248 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 TTC36A6NLP5 189 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 FIGNL2A6NMB9 653 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 C17orf51A8MQB3 221 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 C9JVG2 144 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 E9PBE3 544 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 E9PLN8 166 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ADAM10O14672 748 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ANKRD28O15084 1053 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 NKX2-2O95096 273 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 IL33O95760 270 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 IGKV1D-16P01601 117 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ALOX5P09917 674 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 KIR3DL1P43629 444 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 PSMD4P55036 377 aaKnown RBP10.79□□□□□ -0.68
RAB5C-204ENST00000547517 HBA1P69905 142 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 STX5Q13190 355 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 SLC9B1Q4ZJI4 515 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 EIPR1Q53HC9 387 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 EMC4Q5J8M3 183 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 WIPI1Q5MNZ9 446 aaPredicted RBP10.79□□□□□ -0.68
RAB5C-204ENST00000547517 WLSQ5T9L3 541 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 OR5M10Q6IEU7 315 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ZNF585AQ6P3V2 769 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 FIGNL1Q6PIW4 674 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 MRGPRGQ86SM5 289 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ANKRD46Q86W74 232 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 RPRMLQ8N4K4 120 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 COX18Q8N8Q8 333 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 WDSUB1Q8N9V3 476 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 SLC16A11Q8NCK7 471 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 OR56A1Q8NGH5 318 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 OR4A15Q8NGL6 344 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 NEIL3Q8TAT5 605 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 PIWIL2Q8TC59 973 aaKnown RBP10.79□□□□□ -0.68
RAB5C-204ENST00000547517 HOXB13Q92826 284 aaPredicted RBP10.79□□□□□ -0.68
RAB5C-204ENST00000547517 SARAFQ96BY9 339 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 NTNG2Q96CW9 530 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 MARK4Q96L34 752 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 DMRTA2Q96SC8 542 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 VKORC1Q9BQB6 163 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ACKR4Q9NPB9 350 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ACAD8Q9UKU7 415 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 SLC6A5Q9Y345 797 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 NINQ8N4C6 2090 aa10.79□□□□□ -0.68
RAB5C-204ENST00000547517 ICE1Q9Y2F5 2266 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 RNF103-CHMP3A0A140T963 221 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 RNASET2O00584 256 aaKnown RBP10.78□□□□□ -0.68
RAB5C-204ENST00000547517 DYNC1I1O14576 645 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 DIAPH2O60879 1101 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 UTS2O95399 124 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 HMGN2P05204 90 aaKnown RBP10.78□□□□□ -0.68
RAB5C-204ENST00000547517 HPNP05981 417 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 TCEA1P23193 301 aaKnown RBP10.78□□□□□ -0.68
RAB5C-204ENST00000547517 MAP3K8P41279 467 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 CCT3P49368 545 aaKnown RBP10.78□□□□□ -0.68
RAB5C-204ENST00000547517 SMSP52788 366 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 CLNS1AP54105 237 aaKnown RBP10.78□□□□□ -0.68
RAB5C-204ENST00000547517 WNT3P56703 355 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 UFM1P61960 85 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 PPP2R2AP63151 447 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 GRAMD1BQ3KR37 738 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 FAM174BQ3ZCQ3 159 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 GXYLT1Q4G148 440 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 SPANXN4Q5MJ08 99 aa10.78□□□□□ -0.68
RAB5C-204ENST00000547517 CCNJQ5T5M9 372 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms