RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 FGF4P08620 206 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 HOXD4P09016 255 aaPredicted RBP9.64□□□□□ -0.87
NELFE-213ENST00000494956 BCKDHAP12694 445 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 CEACAM8P31997 349 aaPredicted RBP9.64□□□□□ -0.87
NELFE-213ENST00000494956 GABRA3P34903 492 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 GPC1P35052 558 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 ETV4P43268 484 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 PNLIPRP2P54317 469 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 SNTA1Q13424 505 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 PTGR1Q14914 329 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 KRT71Q3SY84 523 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 NHSL2Q5HYW2 709 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 EMBQ6PCB8 327 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 APOOLQ6UXV4 268 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 IKBIPQ70UQ0 350 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 SZRD1Q7Z422 152 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 ZAR1Q86SH2 424 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 MARCH3Q86UD3 253 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 C9orf106Q8NAJ2 232 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 OR5M1Q8NGP8 315 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 RNF138Q8WVD3 245 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 NRGNQ92686 78 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 PPCDCQ96CD2 204 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 GIMAP5Q96F15 307 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 RMND5BQ96G75 393 aaPredicted RBP9.64□□□□□ -0.87
NELFE-213ENST00000494956 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 TUBA1CQ9BQE3 449 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 LMF2Q9BU23 707 aaKnown RBP9.64□□□□□ -0.87
NELFE-213ENST00000494956 TRMOQ9BU70 441 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 G6PC3Q9BUM1 346 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 OR2B2Q9GZK3 357 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 STMN4Q9H169 189 aaPredicted RBP9.64□□□□□ -0.87
NELFE-213ENST00000494956 DSN1Q9H410 356 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 FBXO34Q9NWN3 711 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 SHISA8B8ZZ34 492 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 H0YC42 278 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 FADS1O60427 444 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 ZIC3O60481 467 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 CHEK2O96017 543 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 ACP2P11117 423 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 LAMP1P11279 417 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 NEFHP12036 1026 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 DPP4P27487 766 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 SSTR2P30874 369 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 SRD5A2P31213 254 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 EVI2BP34910 448 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 RNF144AP50876 292 aaPredicted RBP9.63□□□□□ -0.87
NELFE-213ENST00000494956 TPD52P55327 224 aaPredicted RBP9.63□□□□□ -0.87
NELFE-213ENST00000494956 GFRA1P56159 465 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 FOXF2Q12947 444 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 PDE7AQ13946 482 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 EFR3AQ14156 821 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 MPP2Q14168 576 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 CYP27C1Q4G0S4 372 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 XKR7Q5GH72 579 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 NSUN5P2Q63ZY6 315 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 RNF165Q6ZSG1 346 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 IFNEQ86WN2 208 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 CNPY4Q8N129 248 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 MREGQ8N565 214 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 KRTCAP2Q8N6L1 136 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 GATSQ8NAP1 163 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 NUP43Q8NFH3 380 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 OR6Y1Q8NGX8 325 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 GPR151Q8TDV0 419 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 C14orf79Q96F83 325 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 C16orf58Q96GQ5 468 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 NPAS1Q99742 590 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 TMEM109Q9BVC6 243 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 C20orf27Q9GZN8 174 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 Q9N2J8 555 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 SIRT3Q9NTG7 399 aaPredicted RBP9.63□□□□□ -0.87
NELFE-213ENST00000494956 TAS2R10Q9NYW0 307 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 PPP4R1LQ9P1A2 415 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 DKKL1Q9UK85 242 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 PCDHGB3Q9Y5G1 929 aa9.63□□□□□ -0.87
NELFE-213ENST00000494956 MPDZO75970 2070 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 CLCA1A8K7I4 914 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 HSPB2A8KAH6 182 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 H0Y3Z8 333 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 RGS16O15492 202 aaPredicted RBP9.62□□□□□ -0.87
NELFE-213ENST00000494956 UTS2O95399 124 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 IL33O95760 270 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 ACTL6AO96019 429 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 IL2RAP01589 272 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 PRPS2P11908 318 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 UQCRC1P31930 480 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 FRKP42685 505 aaPredicted RBP9.62□□□□□ -0.87
NELFE-213ENST00000494956 SERPINB4P48594 390 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 LHX2P50458 406 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 MANFP55145 182 aaKnown RBP9.62□□□□□ -0.87
NELFE-213ENST00000494956 CLDN18P56856 261 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 B3GALT5-AS1P59052 145 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 MYBPHQ13203 477 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 HSPB2Q16082 182 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 DECR1Q16698 335 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 SLC25A35Q3KQZ1 300 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 GRAMD1BQ3KR37 738 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 C6orf136Q5SQH8 315 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 CCNJQ5T5M9 372 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms